Gene Rmet_5326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5326 
SymbolzneR 
ID4042187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2035367 
End bp2036032 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID637980744 
Producttwo component transcriptional regulator 
Protein accessionYP_587454 
Protein GI94314245 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.575046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGC TGCTGGTCGA GGATGACCGC ATGATCGGAC AGGTGGTGCA GGACGCCCTG 
AAGGACGCCT CCTGCGCCGC CGACTGGGTC GAGGATGGAC AGGCCGCACT GGACGCGCTG
GATCGCCAAC ACTATGACGT GGTCTTGCTG GATCTGGGCC TGCCACGCAA GAGCGGCCAT
GCGGTGCTGA CTTCGCTGCG CGCGCGTGGC AGCGCCGTGC CGGTGCTGAT CCTCACGGCG
CGGGACGCAC TCGAAGACCG CATCGGCGGG CTCGATGCGG GTGCCGACGA CTATCTGGTC
AAGCCATTCG AGATGGATGA ACTGCTCGCG CGAATGCGGG CTGTGTGGCG CCGGAGAAGT
GGTCTGGCGT CATCGGTGCT CGGCAATGGC CGCGTCTCGC TGGATCTGTC GACCCGGCAG
GCCACCCTGA CGGGCGGCGC GCCCCAGCAA CTCACGAATC GCGAGTTCGC GCTGCTGCAG
GCGTTGCTGG CACGCCCAGG CGCAATCCTG TCGCGTGCCG AGCTTGAAGA GCGCATCTAT
GGCTGGGGCG ATGAAGTGGA AAGCAATGCG GTCGAGTTCC TGATCCACGG CCTGCGCAGG
AAGCTTGGCA GCACCATCAT CAGAAACGTC AGGGGGGTGG GATGGCAGGT GCCGAAGGAA
GGCTGA
 
Protein sequence
MRVLLVEDDR MIGQVVQDAL KDASCAADWV EDGQAALDAL DRQHYDVVLL DLGLPRKSGH 
AVLTSLRARG SAVPVLILTA RDALEDRIGG LDAGADDYLV KPFEMDELLA RMRAVWRRRS
GLASSVLGNG RVSLDLSTRQ ATLTGGAPQQ LTNREFALLQ ALLARPGAIL SRAELEERIY
GWGDEVESNA VEFLIHGLRR KLGSTIIRNV RGVGWQVPKE G