| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5323 |
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| Symbol | zniR |
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| ID | 4042184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2033310 |
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| End bp | 2033930 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980741 |
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| Product | transcriptional regulator two component heavy metal regulatory response ZniR |
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| Protein accession | YP_587451 |
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| Protein GI | 94314242 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.844748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCACAT CCGCAGACAA TACTCCCCAC CAGATTCTAT GCATCGAAGA CGATGCAGAG
ACCGCTACGC TCATCGCGGA AGAACTGACC GAGCGAGGCT TCGCCGTGAC CGTCGCCCAT
GACGGCCAGG AAGGCTTTGC CGCCATTCTG CGCATGCCAC CCGATCTTGT CCTGTGCGAT
GTGGGCATGC CTGTCATGGA CGGCTTCGAG GTGCTCGCGA AACTGCGCGC GCTGGCCCCG
CGCTATGCTG AAGTGCCTTT CGTTTTCCTA ACCGCACTGG CCCAGCGCGA TGCCGAACTC
AAGGGACGCC GTCTGGGCGC GGACGACTAC GTCGCCAAAC CCGTGGATTT TGACATCCTT
GAGAGCATTA TCGAAGCGCG GCTGTCGCGC GCTGTCAAAC CGCAACAACG CACCCCGCAG
AACGTCACGC TGAGCGAGCG CGAGATCGAG GCGCTTTCAT GGTCCGCGCG CGGCAAGACG
TCGGGCGAGA TCGCGACGAT CCTGGGGCTG TCGAAGCGGA CGGTCGATTT CCATATCGAC
CGCGCCAGGG AGAAACTGGG CGTGGCCACG CGGGTCGAAG CCGTGGTGCG CGCGGCCACC
GAGGGGTTCA TCAAACCGTA G
|
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| Protein sequence | MVTSADNTPH QILCIEDDAE TATLIAEELT ERGFAVTVAH DGQEGFAAIL RMPPDLVLCD
VGMPVMDGFE VLAKLRALAP RYAEVPFVFL TALAQRDAEL KGRRLGADDY VAKPVDFDIL
ESIIEARLSR AVKPQQRTPQ NVTLSEREIE ALSWSARGKT SGEIATILGL SKRTVDFHID
RAREKLGVAT RVEAVVRAAT EGFIKP
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