Gene Rmet_5322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5322 
SymbolzniS 
ID4042183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2031611 
End bp2033200 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content64% 
IMG OID637980740 
Producthistidine kinase sensor 
Protein accessionYP_587450 
Protein GI94314241 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.968492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGGC TTTCCGTAGC CCCGCTGGCA CAGCTCAATC GATTGCGCGT GCGTCTGTCG 
CTGGTGTTCG TCCTGTTCCT GCTGCTCGTA ATCGGGCTGG GCGCTTTCAG CATCAACCGG
CTCAGCGCCT TTCACAACGT CGCGGCCGAG ATCAGTGGCC GCTGGCTGCT GAGCAACCGC
ATCGCAGGCG ATCTCAACAA CAGCATCTCG GACTTCCGTG CTACCGAGGG TGAACTGCTG
ACCGCGCGTC GCGGCAAGGA TCGGGGGCGC GCGGAAGGTT CGCTCGCGGT ACTCGATGAA
GAAATCGCGG ATGCCAAACG GCGCTACGAA ACGATCGAGC ATGACCCCAT CGAACTGGAC
CTCTACCGGC AGTTCAGCGA GCAGTGGCGG GCATATCGCG AACTGGCCAA CCGAGTGCTG
GTGCTTTCCC AGCGCGATGA CAAGACCGAC GCCATCGCGC TTTACTACCA GGAGTCCCGA
CGCGCCTTCA CTGTGGCCAA TGCCACGCTG GCCACGCTGA CCGAGCGCAA CGTCACCGGC
GCGAACGAGG CTACCCAGGC GGAGGCCGTA GCCTACCGGC ATGCCAGGGA CCTGATCGTG
AACGCGATCA TCGTGGCGGC GCTGCTGATG ATTGCCGGCG TGCTTTACTT CGTCACGGCT
GTGACCAATC CAATCGCGGA ACTGGTTGAC CGGATGCACC GGATCTCCGA CAACGAAACC
GAGATCGACA TCCCATCGAC CGAGCGCCCC GACGAAGTGG GCGAGATCGC TCGCGCCGTG
GTCCGGTTCC GCGATAACAC GGTGGCGCTG GCGCAAAGCC GCGCCACGCT GGCCGAGCAG
GCCCGCACGC TGGAAATCAC GCTGGCCAAC GAGCGGCGCA TGGCGGAGCT GCAGCGCAAC
TTCGTGTCGA TGGTGTCGCA CGAATTCCGC ACCCCGTTGA CCGTGATCGA CGGCTACGCG
CAGCGCCTGA GTCATATCAA GCCGCCGCTG TCGCTTGAGG CGGTGCAGGA TCGTTCGAGC
AGAATCCGCG CGGCGGTGCG GCGGATGACC GCGCTGATCG AAGATATGCT CGGGGCATCG
CAGGTGCTTG ACCTGGCAAC ACCGGGGGCG TTTCAACGCA CGGAGTTCTC GTTACACCTG
CTGGTGCACG AGGTCTGCGA GATGCATCGC GAAAGTTCGC CGGATGCGCA GATTGTCGAG
CAGTGGCACG CCGACGTACC CGAGGTTTTC CATGGCGATG CGCGTTTGCT GTTCCAGGCC
GTGAGCAATC TGATCGGGAA CGCCGTCAAG TACTCGCCGC CGAAGACGCC GGTCAGCGTG
GATGTATCGA TGGAATCGGG CGCGATCCTG ATTTGCGTCG CGGACCAGGG CATCGGCATT
CCGGAGAAGG ATCTCGGCCA CGTGTTCGAG CGATACGTGC GTGGCGCCAA TGTGACCGGC
ACCGCCGGCG CGGGCGTGGG TCTCTATATC GTCCGGCTGG CCGCCGAATT GCATGGCGGC
ACGGTGTCGG TGCGAAGCGC GGAAGGCACG GGCTCGCGCT TCTTGCTCAG GCTGCCAGAA
GCGCCAGCGC CAGCGCCGCT CAGCGCGTAG
 
Protein sequence
MGRLSVAPLA QLNRLRVRLS LVFVLFLLLV IGLGAFSINR LSAFHNVAAE ISGRWLLSNR 
IAGDLNNSIS DFRATEGELL TARRGKDRGR AEGSLAVLDE EIADAKRRYE TIEHDPIELD
LYRQFSEQWR AYRELANRVL VLSQRDDKTD AIALYYQESR RAFTVANATL ATLTERNVTG
ANEATQAEAV AYRHARDLIV NAIIVAALLM IAGVLYFVTA VTNPIAELVD RMHRISDNET
EIDIPSTERP DEVGEIARAV VRFRDNTVAL AQSRATLAEQ ARTLEITLAN ERRMAELQRN
FVSMVSHEFR TPLTVIDGYA QRLSHIKPPL SLEAVQDRSS RIRAAVRRMT ALIEDMLGAS
QVLDLATPGA FQRTEFSLHL LVHEVCEMHR ESSPDAQIVE QWHADVPEVF HGDARLLFQA
VSNLIGNAVK YSPPKTPVSV DVSMESGAIL ICVADQGIGI PEKDLGHVFE RYVRGANVTG
TAGAGVGLYI VRLAAELHGG TVSVRSAEGT GSRFLLRLPE APAPAPLSA