| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5321 |
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| Symbol | zniC |
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| ID | 4042182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2030065 |
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| End bp | 2031621 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980739 |
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| Product | heavy metal cation tricomponent efflux outer membrane porin ZniC |
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| Protein accession | YP_587449 |
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| Protein GI | 94314240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.944742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCAG ATCACCGCAG CCCTTCCATT CGTTCGAGAA TCCCATTCGC CGGCACGGCT
TGCGCCCTGG CCGTTTGCGG CGTTCTGACG GCGTGCGCCG TCGGCCCCAA TTTCCAGACG
CCCAAGGCGC CTGATGCCAC CGCGTACACA CCCAAGCCGC TGCCCACCGA GACGGCATCC
GCGCCGGTGC AAGGCGGCGA AGCCCAGCGC TTCGTGGAAG GCATGCAGAT CCCCGAGCAG
TGGTGGAGCA TGTTGCACTC GGAAAAGCTC GACCGCTTTA TCGCGGCAGC GATGAAGGCC
AATCCGACGG TGACGGCCGC GCAAGCAGCG CTGCGGCAGG CCCAGGCGCA AGTGCGCGCG
CAGCAGGGCT TCTTCTTCCC GACCATCTCG GGTTCCTATT CGCCATCGCG GCAGCGCAAT
GCGGTAGGAA CGATCTCGCC GACGCTGACG TCTGGCGATC CGCTCTTCAA CCTGCACACG
GCGGAACTGT CGATCAGCTA CGCGCCCGAT GTGTTCGGCC TGAACCGCCG ACGGGTGGAA
TCGCTGCAGG CGCTCGAGGA TGCGCAGCGT TTCGAGGTGG AGGCTACCTA CCTGACGCTG
GCATCGAACA TCAGCCTGGC CGCTATCGAG GAAGCTTCGT TGCGCGCCCA GATCGACGCG
CAACAACGCA TCGTCGCCAT CGAGACCAAG CTGTACAACC TGCTGCAGAA GCAATTCACG
CTCGGGTTCG TCAGCGGTCT CGAAGTGGCC GCGGCCCGGG CCCAGCTTGC GCAAGCCGAG
CAGGCATTGC CAGGACTGCG CAAGCAACTG GCCCTGCAGC GCGACCTGCT GGCTGCGCTG
GCCGGCAAGC TGCCGGCCGA TCCGCTCGAC GCCGAGTTCA CGTTCGACGA TTTCAAGTTG
CCGGCGGAAC TTCCGGTGTC GCTGCCGTCT GAACTGGTGC GGCAGCGCCC GGACGTGCGC
GCGGCCGAAG CACAACTGCA TTCGGCCACG GCGGAAGTCG GCGTGGCTAT CGCCAACATG
CTGCCGCAGC TCACCATCAC TGGCTCATAC GGCGGCACGG CCACCGTGTT CAACCAGATG
TTCAGCGCCG GCAACGTCTT CTGGAGCCTG GCGGGCAACG TCGCGCAAAC CTTCTTCGCG
GGCGGCACGA TGCTGGCGCT CAAGCACGGC GCCGATGCCG CGCTCGTGCA GGCGGAGGCC
CAGTACCGCA GCACCGTCAT CAACGCGTTC CAGAACGTGG CCGATACGCT GCACGCGATC
GACGCCGATG CGGAAACGCT GCGTGCGGCC ATCACCTCGG AGCAGGCCGC GCGCACGACG
CTGGAGATCA CCGAGAAGCA ACTGTCGAGC GGCTACGTCA ATGTGCTGGC CGTGCTCAAC
GCCGAACAGA CGATGCGCAC GGCCACGCAG GCCACGGCAC AGGCGCAGGC CGCGCGCTTC
ACGGATACCG TGGCGCTCTA CCAGTCTCTG GGTGGCGGCT GGTGGAATCG CCAGGCCGAA
GGTACGCAGG TGGGTGACGC GGGCAAGCCG GCCCGCGCCG AAGTCGCTAC GCGCTGA
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| Protein sequence | MLPDHRSPSI RSRIPFAGTA CALAVCGVLT ACAVGPNFQT PKAPDATAYT PKPLPTETAS
APVQGGEAQR FVEGMQIPEQ WWSMLHSEKL DRFIAAAMKA NPTVTAAQAA LRQAQAQVRA
QQGFFFPTIS GSYSPSRQRN AVGTISPTLT SGDPLFNLHT AELSISYAPD VFGLNRRRVE
SLQALEDAQR FEVEATYLTL ASNISLAAIE EASLRAQIDA QQRIVAIETK LYNLLQKQFT
LGFVSGLEVA AARAQLAQAE QALPGLRKQL ALQRDLLAAL AGKLPADPLD AEFTFDDFKL
PAELPVSLPS ELVRQRPDVR AAEAQLHSAT AEVGVAIANM LPQLTITGSY GGTATVFNQM
FSAGNVFWSL AGNVAQTFFA GGTMLALKHG ADAALVQAEA QYRSTVINAF QNVADTLHAI
DADAETLRAA ITSEQAARTT LEITEKQLSS GYVNVLAVLN AEQTMRTATQ ATAQAQAARF
TDTVALYQSL GGGWWNRQAE GTQVGDAGKP ARAEVATR
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