| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5300 |
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| Symbol | fliO |
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| ID | 4042161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2002650 |
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| End bp | 2003210 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980718 |
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| Product | flagellar biosynthesis protein, FliO |
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| Protein accession | YP_587428 |
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| Protein GI | 94314219 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3190] Flagellar biogenesis protein |
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| TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.592303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.104724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGTTG CCGCGCGCCG GCTTGCCGCG GGCATTGCCC TTGCGGGCGT TGCCGCTTCC
GGCGCGCAGG CTGCCGACGT CGTACTCAGC ACGGCCCAGG CGGGCATGCC CACCGGCGGC
GCCGCGACCA ACACCACTAC CAGCGCCACT ACTAGCAACA CCGGCGCCAA CGCTCCCGTC
ATCAGCAGTG GGGCCAGCCT GGCGCAAGCC GGTCTGGGCC TGTTCGCCGT CATCGCGCTG
ATCCTGGCGA TGGCATGGGT GGCGCGGCGC GTCGGCCTGG TGCGCCAGGG CTCGGGCAAT
GCGTCGATGA AGGTGGTCGG CAGCCTGATG CTTGGTCCGC GCCAGAGGGT GGTCACGGTG
GAAGTGGGCG GTACCTGGCT GGTGCTTGGT GTGTCGCCCA ATGAAATCCG TCCGCTTCAC
ACGCTGGAAG CACAACCGCA CACCGGTTCT CCGGACGATT CGCGGCCGGG CTCCCAGGCG
GACTCAGGAG TGTCCCGGAA CATGCAGGGC GGATTCGGCG AGCGACTGAT GCGCGCCATG
CAGGAAAACC TCAAGAAATG A
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| Protein sequence | MMVAARRLAA GIALAGVAAS GAQAADVVLS TAQAGMPTGG AATNTTTSAT TSNTGANAPV
ISSGASLAQA GLGLFAVIAL ILAMAWVARR VGLVRQGSGN ASMKVVGSLM LGPRQRVVTV
EVGGTWLVLG VSPNEIRPLH TLEAQPHTGS PDDSRPGSQA DSGVSRNMQG GFGERLMRAM
QENLKK
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