| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5298 |
|---|
| Symbol | fliM |
|---|
| ID | 4042159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2001180 |
|---|
| End bp | 2002190 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637980716 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_587426 |
|---|
| Protein GI | 94314217 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.206495 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACG ACAAGTTCCT CTCGCAGGAC GAGGTAGATG AACTACTGAA AGGCGTATCG
GGCGAATCCG ATGCGCCCGT GGCAAGCGCG CCGGTCGCCG ACGATGGCGG CGTGCGTCCG
TACAACCTGG CCAACCAGGA GCGCATCGTC CGCGGCCGCC TGCACACGCT CGAGATCATC
AACGAGCGTT TTGCCCGCGC CCTGCGCACC GCGCTGTTCA ACTTCATCCG CCGCGGCGCC
GACATCTCGG TAGGCACCGT GCGGATCGAG AAGTACGGCG ATTTCGTGCG CAACCTGCCC
GTCCCGACCA ACCTGAACCT GGTCCACATG AAGCCGCTGC GGGGCACCGC GCTATTCGTG
TACGACCCGA ACCTGGTGTT TCTCGTCGTC GACAACCTGT TCGGCGGCGA TGGCCGTTTC
CACACCCGCG TGGAAGGCCG CGACTTTACC CAGACCGAGC AGCGCATCAT CCGCCGCATG
CTTGACCTCA CGCTTTCCAG CTACGGCCAG GCCTGGCGCA CCGTGCATCC GATCGAGTTC
GACTATGTCC GCTCGGAGAT GCACACGAAG TTCGCCAACG TCGCCGGCCC GAACGATGCC
GTGGTCACCA CCGCGTTCCA CATCGAACTG GGCGCCGTGG GCGGGCAGCT TCATATCTGC
ATCCCGTTCT CGATGATCGA GCCACTGCGC GATCTGCTGA TGAACCCGCT GCAGGACGAG
GTCGAGGTGG ACAAGCGCTG GCTCGGCCAG CTCTCCAACC AGCTACGTGC CGCCGAAGTG
GAACTGGTGG CCGAATTCAC GCACCTGCGC AGCACCGTGG CCGAGGTCCT GGCAATGCGC
GAAGGCGACG TGCTGCCGAT CGAACTGCCG GAACACATCT TCGGCAAGGT GAACGGCGTG
CCCGTCATGC AGTGCGGCTT CGGCACCATG AACGGCCAGT ACGCGCTGCG CGTGGAACGG
ATGCTCAATT ACCAAGACAG CGATTCCAAC AAGGAAACCG ATCATGACTG A
|
|---|
| Protein sequence | MAYDKFLSQD EVDELLKGVS GESDAPVASA PVADDGGVRP YNLANQERIV RGRLHTLEII
NERFARALRT ALFNFIRRGA DISVGTVRIE KYGDFVRNLP VPTNLNLVHM KPLRGTALFV
YDPNLVFLVV DNLFGGDGRF HTRVEGRDFT QTEQRIIRRM LDLTLSSYGQ AWRTVHPIEF
DYVRSEMHTK FANVAGPNDA VVTTAFHIEL GAVGGQLHIC IPFSMIEPLR DLLMNPLQDE
VEVDKRWLGQ LSNQLRAAEV ELVAEFTHLR STVAEVLAMR EGDVLPIELP EHIFGKVNGV
PVMQCGFGTM NGQYALRVER MLNYQDSDSN KETDHD
|
|---|
| |