| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5293 |
|---|
| Symbol | |
|---|
| ID | 4042154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1994314 |
|---|
| End bp | 1994883 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637980711 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587421 |
|---|
| Protein GI | 94314212 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.11545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCG GAAACCAGCC AACGGTCGTA ATCGTTCCCG GCTTTCGCGA TCACATGCCT
GAGCACTGGC AGTCACTGCT TGCGGAGCGC CTGCAGCAGC AGGGGCGAGC GGTGCGCATC
GTGCCGCAGA TCGATCACGA CAAGAGGTTG CGCCGCGCGA GAGTGGAGAA CCTCGAGCGT
GTCGTCAGCG GCATCCCAGG GCCGGTCATC CTCGTCGCGC ATAGCGTGGG CTGCCTGATT
ACCGTTCACT GGGCACAGGA GACGAAGTGC GCGGTGCAAG GCGCGCTGCT TGCTGCGCCG
GCCGACTTTG ACAACCCCTT GCCGCCCGGA TACACCGATC TGCCGACGCT GGCAAAGGAA
GGCTGGACGC CGATTCCACG TCGACAATTG AAATTCCCGA GCATCGTGGT CGCAAGCCGC
AATGATCCGC TCGGAAAATT CGAGCGAATC CAGGAACTGG CGCAGGCGTG GGGCAGTCGT
TGCATCGACG CCGGGGAAGT CGGGCATCTC GGACCTGTGG ATGGCTTTGG CACATGGCCG
CTGGCGGAAG AACTGGTTCA GCAACTCTGA
|
|---|
| Protein sequence | MTSGNQPTVV IVPGFRDHMP EHWQSLLAER LQQQGRAVRI VPQIDHDKRL RRARVENLER
VVSGIPGPVI LVAHSVGCLI TVHWAQETKC AVQGALLAAP ADFDNPLPPG YTDLPTLAKE
GWTPIPRRQL KFPSIVVASR NDPLGKFERI QELAQAWGSR CIDAGEVGHL GPVDGFGTWP
LAEELVQQL
|
|---|
| |