| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5291 |
|---|
| Symbol | |
|---|
| ID | 4042152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1992305 |
|---|
| End bp | 1993240 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637980709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587419 |
|---|
| Protein GI | 94314210 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.125866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAC CACAGAGCAA GGTGATCGTC ACCTGCGCCG TGACCGGCAG TATTCACACC
CCCACAATGT CGCCTTATCT CCCCATCACC GCCAGGGAGA TCGAAGACGA GGCCGTTGCC
GCGGCGGAGG CTGGCGCGGC CATTGTCCAT CTCCATGCGC GAAACCCGGA GAATGGCCAG
CCATCGCAAG ACCCGGCCCT CTTTCGTGCG TTTCTCCCAC GGATCGCGGC CCGTTCGGAC
GTCGTGATCA ATCTCACGAC TGGTGGCGCC CCCAACATGT CGGTGGAAGA ACGCTTGCAG
CCGGCACTTC AACTCAAGCC CGAGGTTGCC TCGTTGAACA TGGGGTCCAT GAACTTCGGT
CTCTATCCGA TGCTCGCCCG GCACGCGACG TTCAAGCACG ACTGGGAACG TCCTTACCTC
GAAGGCTCCG AGGACCGTGT GTTCCGCAAC ACGTTCAAGG AGATCCGCTA CATCCTCGAA
TCCTGCGCCG ACAACGGCAC ACGCTTCGAG ATCGAGTGCT ACGACACGAG CCACCTTTAC
ACGGCCGCGC ACTTCATTGA TCGCGGCATC CTCAAGCCGC CTTTCTTCAT CCAGTCCGTG
TTCGGCCTGT TGGGCGGCAT CGGCACGCAC GCCGACGATG TCATGCACAT GCGCCGCACC
GCGGAGCGCC TGTTCGGCAA GGACTACTAC TGGTCCGTGC TCGGCGCTGG TCGCAGCCAG
ATGCCGATTG CATCGATGGC GGCGGCGATG GGCGGAAACG TCCGCGTTGG CCTGGAGGAT
TCACTCTGGG AAGACCGCGG CAAGCTGTCC ACCAGCAACG CCGACCAGGT CAAACGCGTG
GTTGGCATTC TGAGGTCGCT GAACCTCGAC GTGGCATCGC CGGACGAGGC CCGCGACATG
CTGCAGCTAA AGGGCCGCGA TGCCGTCGCG TTCTGA
|
|---|
| Protein sequence | MAAPQSKVIV TCAVTGSIHT PTMSPYLPIT AREIEDEAVA AAEAGAAIVH LHARNPENGQ
PSQDPALFRA FLPRIAARSD VVINLTTGGA PNMSVEERLQ PALQLKPEVA SLNMGSMNFG
LYPMLARHAT FKHDWERPYL EGSEDRVFRN TFKEIRYILE SCADNGTRFE IECYDTSHLY
TAAHFIDRGI LKPPFFIQSV FGLLGGIGTH ADDVMHMRRT AERLFGKDYY WSVLGAGRSQ
MPIASMAAAM GGNVRVGLED SLWEDRGKLS TSNADQVKRV VGILRSLNLD VASPDEARDM
LQLKGRDAVA F
|
|---|
| |