| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5288 |
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| Symbol | |
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| ID | 4042149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1989404 |
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| End bp | 1990564 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980706 |
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| Product | outer membrane porin |
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| Protein accession | YP_587416 |
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| Protein GI | 94314207 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.13289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAGA GACTTTTTGC CCTGGCCGCC GCTTGCGCGT GTGGCGCGGC CAACGCGCAA
TCGAGCGTGA CCTTGTACGG TGTGGTCGAT GTGAACGTGG AATACGTCAA CCACGTCGGG
GCCGTGCCGC AGGCAGGTAA CGGCTACAAC CCCGGTCCAC CCCAGACGGT GTTTCGCGAG
AATTCTGGCG GCTACTCCGG ATCGCGTTGG GGTCTTCGCG GCGTCGAAGA CCTCGGGGGC
GGCCTGAAGT CGATCTTCGT GCTGGAAAAC GGCTTCAATG CCGATACCGG CACGCTGCAA
CAGGGTGGAC GCATGTTTGG GCGCCAGGCC TTCGTGGGCC TCGACACACG CTTCGGTGTG
TTCACGTTCG GCCGACAGTA CCAATCGATT TTCTCCACCA TGGCCAACTT CGTCCCAGCG
CGATATGCCA CGCAGTATGA GCCGACGGGT GTGGTGGCAG GGGCCAATTT CCGCCAGGAC
AACACGGTCA AGTACTCAGG GACGTTCGGC CCCTTCACCG CGCAGGCGGA CTGGTCGTTC
GGGGTTGGCA CGACGCTGCC GTCCACCTAC CCCACGGTGC CGACGGCGGG TGGTGCCGGT
GAAGTACCGG GCCAGTTCCG CCGCGATTCG GCCTATGGTG TCGCCTTGAG CTATCTGGCT
GGGCCGGTCG GGCTGGGTAT TGGCTATGAC CAGTGGAATC CGACCATCGG CACGGGCAAT
GGCACATTCA AGAAGGCCGT TGTCATGGCC AGCTACGCGT TCAACGATAC GGCGAAGCTG
ATGGGTGGTT ACCGATGGGG GCAGAACAAG GATCCGGGCG GCACGACGAT CCTGCGCGAT
GACTTCTACT GGATTGGTGG CCAATACCGC TTCTCGTCGG CGCTGGACTT CACGCTCGAG
TATGACTATC AGAACGTGAA GAACCTGGGT GGAAACAACG GCGTGGCCAA CCCCTGGCAG
ATTGCCCTGA TCGCAGACTA TGCTTTCTCC AAGCGAACGG ACGTGTACCT GACCACGGCA
TACAGCAGGA ACGCCGGCCT GGCGATGGAA TCGGCAGCGA GCGGCTTCGC GACCAGCCTG
GCGTTGGGCA ATTCCTATGC GCTGGCCAAC GGACAGAAAT CCATGTTCGG CGCGGCATTG
GGGATTCGAC ACGTGTTCTG A
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| Protein sequence | MNKRLFALAA ACACGAANAQ SSVTLYGVVD VNVEYVNHVG AVPQAGNGYN PGPPQTVFRE
NSGGYSGSRW GLRGVEDLGG GLKSIFVLEN GFNADTGTLQ QGGRMFGRQA FVGLDTRFGV
FTFGRQYQSI FSTMANFVPA RYATQYEPTG VVAGANFRQD NTVKYSGTFG PFTAQADWSF
GVGTTLPSTY PTVPTAGGAG EVPGQFRRDS AYGVALSYLA GPVGLGIGYD QWNPTIGTGN
GTFKKAVVMA SYAFNDTAKL MGGYRWGQNK DPGGTTILRD DFYWIGGQYR FSSALDFTLE
YDYQNVKNLG GNNGVANPWQ IALIADYAFS KRTDVYLTTA YSRNAGLAME SAASGFATSL
ALGNSYALAN GQKSMFGAAL GIRHVF
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