| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5284 |
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| Symbol | dbpA |
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| ID | 4042145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1984131 |
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| End bp | 1985534 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980702 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_587412 |
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| Protein GI | 94314203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.22294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTT CAGCCCCTAC CTCATTCGCC ACGCTGCCGC TGTCCGCGGC CATGCAGGCT
ACCCTCGTCC AGCTCGGCTA CGACGCCATG ACGCCGATCC AGGCCGCCAG CCTGCCGCTC
GCGCTGGCTG GTCACGACCT CATCGCCCAG GCCCGCACCG GCAGCGGCAA GACCGCAGCG
TTCGCGCTCT CACTGCTGCA TCGTCTCGAT CCGCGTCCGC TCGACGTACA GGCGCTGGTG
CTCTGTCCCA CACGTGAACT GGCCGATCAG GTCACACAGG AGATCCGTCG TCTCGCCCGC
GCGGAGGACA ACGTCAAGGT GCTGACGCTC AGTGGCGGCA CGCCAATCCG GCCGCAGGTG
GAGAGCCTTG TTCACGGCGC GCACGTTGTC GTAGGCACGC CGGGCCGCAT CATCGATCAC
CTCGATCGCG GAAGCCTGAA TATCGATGCG ATCAACACGC TGGTGCTCGA TGAAGCGGAC
CGCATGCTCG ACATGGGCTT TCACGATGAC ATCGCATTTA TCGCCAGCCA CGCACCGAAG
GACCGGCAGA CGCTGCTGTT CTCGGCCACC TATCCGGCTG CCATCGACAA GCTCGCCCAT
CGCTTCCTGC GCCAGCCGAA GACGGTGAAG GTGGAGGAGG CGCACGACGC GGCCACCATC
ACCCAACGCT TCTACGAGGT GGAGGAGGGC GATCGTCTCA ACGCCGTCGG CCGATTGCTC
GACCATTTCC GCCCGGCCAC CACACTCGCC TTCTGTAATA CGAAGGCGCG CTGCCGCGAT
CTGGCCGACC TGCTGCGCGC GCAGGGATAT GCCGCGCTTG AACTGCACGG TGACCTCGAT
CAGCGCGATC GCGACCAGGT GCTGGTGCAG TTTGCTAACC GGAGCTGCTC GGTGCTGGTA
GCTACCGACG TGGCCGCACG CGGGCTCGAC ATCGCGCAGC TGGAAGCCGT GATCAACGTG
GACGTGACGC CCGACCCCGA GGTCCATGTC CACCGCGTCG GCCGTACCGG ACGCGCTGGC
GAAGCAGGCT CGGCCTTCAG CCTCGTCAGC CTGGATGAAA TGGGTCGCGT CGGCAACATC
GAGCAGCACC AGGGCGGTGA GTTCGAATGG CACGCGCTTG ACGAACTGAA GCCGTCAGGC
GGCGGACGTC TGCTGCCGCC AATGGTCACG CTGCAGATGC TGGGTGGGCG CAAGGAGAAG
ATCCGGCCCG GCGACATCCT CGGCGCGCTG ACCGGAGAGG CTGGCTTCAC AAAGGAGCAG
ATCGGCAAGA TCAGCGTGAT GGAGATGTCG ACCTATATCG CCGTGGACCG CGCCATCGGT
CGCGAGGCGG TGAAACGGCT GAACGAAGGC AAGGTGAAGG GCCGCAAGGT GAGAGTGAGA
ATGCTGACGA CCGATCAGCG GTAA
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| Protein sequence | MTSSAPTSFA TLPLSAAMQA TLVQLGYDAM TPIQAASLPL ALAGHDLIAQ ARTGSGKTAA
FALSLLHRLD PRPLDVQALV LCPTRELADQ VTQEIRRLAR AEDNVKVLTL SGGTPIRPQV
ESLVHGAHVV VGTPGRIIDH LDRGSLNIDA INTLVLDEAD RMLDMGFHDD IAFIASHAPK
DRQTLLFSAT YPAAIDKLAH RFLRQPKTVK VEEAHDAATI TQRFYEVEEG DRLNAVGRLL
DHFRPATTLA FCNTKARCRD LADLLRAQGY AALELHGDLD QRDRDQVLVQ FANRSCSVLV
ATDVAARGLD IAQLEAVINV DVTPDPEVHV HRVGRTGRAG EAGSAFSLVS LDEMGRVGNI
EQHQGGEFEW HALDELKPSG GGRLLPPMVT LQMLGGRKEK IRPGDILGAL TGEAGFTKEQ
IGKISVMEMS TYIAVDRAIG REAVKRLNEG KVKGRKVRVR MLTTDQR
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