Gene Rmet_5278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5278 
Symbol 
ID4042139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1977955 
End bp1978950 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID637980696 
Productextra-cytoplasmic solute receptor 
Protein accessionYP_587406 
Protein GI94314197 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.777708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.21823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAT GCATGGCGCG CCGCACGGCG CTCAGGATGC TGGCGGGGGC GGCCATTGTC 
GTGGCCGCCG TCCCGACCGG CTCCGCATTT GCCGCCGACC ACTGGCCGTC GAAGCCGATC
ACGCTCGTTG TGCCGTTCGC GTCGGGCGGC ACCACGGACA TCATCGGCCG TGCGGTCGGA
CAACGGCTGG GCGAGGCGCT TGGCCAGCCC GTGGTGGTCG ATAACCGTCC CGGCGCGGGT
GGCACCATCG GCGGCGCGCT GGTAGCGCGT GCGAATCCGG ACGGCTACAC GTTCCTGCTG
GCGACCGTGG CTCACACCAT GGCCCCCGGC ATCTACAAGA CGCTGCCGTA CGATTTCCAG
AAGGATCTGG AGCCGATCGG CATGGTGGCG CTGACGCCCA ACGTCGTGCT GGTGAACACG
TCGATTCCCG CCAGGAACGT GCAGGAACTG ATCGCCTACA TCAAGGCCAA TCCGGGCAAG
GTGAACTACG GTTCGGCGGG CATCGGCAGC ACCGAGCACC TGTCCGGCGA GCTGTTCCGC
TCGGCCACGG GCACCGATAT CTCGCACGTG CCCTACAAAG GCGGCGCGCC GATGATGACC
GACCTGATCG CGGGCCAGAT CCAGATGGCG ATCGAGACCA GCCCGTCGGC GAATCCGCAC
GTGAAGAGCG GCAAGGTCAA GGCGCTGGCC GTCACGTCGG CCAAGCGTTC GCCCGCCTAT
CCTGGCGTGC CGACGGTGGC GGAAAGCGGC GTGCCCGGCT ACGAGGTGAC CACGTGGTAT
GCGCTGATGG CGCCGCGCGG CACCCCGGAG CCGATTCGCC AGCGTATGAG CGCGGAACTT
GCCAAGGTGC TGAAGCAGTC GGACGTGCAG AAGCGCTTCG ACGATCAGGG CGTGACGGCT
GGCGACATGA CGCCGCCGCA GCTTGCCGCC TTCATCAAGA CGGAAACCAC CAAGTGGACC
AAGGTGGCGA AGGATTCGGG CGCGAAGGCC GAGTAA
 
Protein sequence
MTPCMARRTA LRMLAGAAIV VAAVPTGSAF AADHWPSKPI TLVVPFASGG TTDIIGRAVG 
QRLGEALGQP VVVDNRPGAG GTIGGALVAR ANPDGYTFLL ATVAHTMAPG IYKTLPYDFQ
KDLEPIGMVA LTPNVVLVNT SIPARNVQEL IAYIKANPGK VNYGSAGIGS TEHLSGELFR
SATGTDISHV PYKGGAPMMT DLIAGQIQMA IETSPSANPH VKSGKVKALA VTSAKRSPAY
PGVPTVAESG VPGYEVTTWY ALMAPRGTPE PIRQRMSAEL AKVLKQSDVQ KRFDDQGVTA
GDMTPPQLAA FIKTETTKWT KVAKDSGAKA E