Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5278 |
Symbol | |
ID | 4042139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1977955 |
End bp | 1978950 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980696 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_587406 |
Protein GI | 94314197 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.777708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.21823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAT GCATGGCGCG CCGCACGGCG CTCAGGATGC TGGCGGGGGC GGCCATTGTC GTGGCCGCCG TCCCGACCGG CTCCGCATTT GCCGCCGACC ACTGGCCGTC GAAGCCGATC ACGCTCGTTG TGCCGTTCGC GTCGGGCGGC ACCACGGACA TCATCGGCCG TGCGGTCGGA CAACGGCTGG GCGAGGCGCT TGGCCAGCCC GTGGTGGTCG ATAACCGTCC CGGCGCGGGT GGCACCATCG GCGGCGCGCT GGTAGCGCGT GCGAATCCGG ACGGCTACAC GTTCCTGCTG GCGACCGTGG CTCACACCAT GGCCCCCGGC ATCTACAAGA CGCTGCCGTA CGATTTCCAG AAGGATCTGG AGCCGATCGG CATGGTGGCG CTGACGCCCA ACGTCGTGCT GGTGAACACG TCGATTCCCG CCAGGAACGT GCAGGAACTG ATCGCCTACA TCAAGGCCAA TCCGGGCAAG GTGAACTACG GTTCGGCGGG CATCGGCAGC ACCGAGCACC TGTCCGGCGA GCTGTTCCGC TCGGCCACGG GCACCGATAT CTCGCACGTG CCCTACAAAG GCGGCGCGCC GATGATGACC GACCTGATCG CGGGCCAGAT CCAGATGGCG ATCGAGACCA GCCCGTCGGC GAATCCGCAC GTGAAGAGCG GCAAGGTCAA GGCGCTGGCC GTCACGTCGG CCAAGCGTTC GCCCGCCTAT CCTGGCGTGC CGACGGTGGC GGAAAGCGGC GTGCCCGGCT ACGAGGTGAC CACGTGGTAT GCGCTGATGG CGCCGCGCGG CACCCCGGAG CCGATTCGCC AGCGTATGAG CGCGGAACTT GCCAAGGTGC TGAAGCAGTC GGACGTGCAG AAGCGCTTCG ACGATCAGGG CGTGACGGCT GGCGACATGA CGCCGCCGCA GCTTGCCGCC TTCATCAAGA CGGAAACCAC CAAGTGGACC AAGGTGGCGA AGGATTCGGG CGCGAAGGCC GAGTAA
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Protein sequence | MTPCMARRTA LRMLAGAAIV VAAVPTGSAF AADHWPSKPI TLVVPFASGG TTDIIGRAVG QRLGEALGQP VVVDNRPGAG GTIGGALVAR ANPDGYTFLL ATVAHTMAPG IYKTLPYDFQ KDLEPIGMVA LTPNVVLVNT SIPARNVQEL IAYIKANPGK VNYGSAGIGS TEHLSGELFR SATGTDISHV PYKGGAPMMT DLIAGQIQMA IETSPSANPH VKSGKVKALA VTSAKRSPAY PGVPTVAESG VPGYEVTTWY ALMAPRGTPE PIRQRMSAEL AKVLKQSDVQ KRFDDQGVTA GDMTPPQLAA FIKTETTKWT KVAKDSGAKA E
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