| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5268 |
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| Symbol | alkB2 |
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| ID | 4042129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1967008 |
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| End bp | 1967679 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980686 |
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| Product | N1-methyladenine/N3-methylcytosine demethylase |
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| Protein accession | YP_587396 |
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| Protein GI | 94314187 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.534541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGCCA TGACCTTCGA CCTCTTCGAC GCCCTTCCCG CCGATTCCAA CGCCCCGCCT
GCCGTGGAGA CGCTTGCGCC GGGCGCCGTG GTGTTGCATG GATTCGCGCG GGATGCGGGG
CCGGAACTGC TCGCCGCCGT GCAGACGATC AGTGCCGAGG CGCCGTTCCG CCATCTGATC
ACGCCGGGCG GCCTGCGCAT GTCGGTGGCC ATGACCAATT GCGGCGAGCG TGGCTGGGTG
TCCGATCGCA CCGGGTATCG CTACGATGCG GTCGATCCGG AGTCAGGACG GCCGTGGCCG
GCCATGCCTG CCGTGTTCCG GTCGTTGGCC GAACACGCGG CGGAAGCGGC TGGCTATCCC
GGTTTTGCAC CCGATGCCTG CCTGATCAAC CGCTATCTGC CGGGCACGCG CCTGTCGCTG
CATCAGGATC GCGACGAACT CGATCTGCGC GCACCGATCG TTTCTGTCTC AATGGGCCTG
CCGGCCGTCT TCCTCTGGGG TGGATTGCGT CGCGCCGACC GGCCGGGCCG ATTCCGGCTC
GCGCATGGTG ACGTGGTGGT CTGGGGTGGA CCATCCAGGC TGGTCTTCCA CGGCATCGCC
CCGCTGGCCG ACGGCGATCA TGCGTTGACC GGAAGCGAGC GAATCAACCT GACGTTTCGC
AAGACCCGCT AA
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| Protein sequence | MPAMTFDLFD ALPADSNAPP AVETLAPGAV VLHGFARDAG PELLAAVQTI SAEAPFRHLI
TPGGLRMSVA MTNCGERGWV SDRTGYRYDA VDPESGRPWP AMPAVFRSLA EHAAEAAGYP
GFAPDACLIN RYLPGTRLSL HQDRDELDLR APIVSVSMGL PAVFLWGGLR RADRPGRFRL
AHGDVVVWGG PSRLVFHGIA PLADGDHALT GSERINLTFR KTR
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