| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5266 |
|---|
| Symbol | fliK |
|---|
| ID | 4042127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1964246 |
|---|
| End bp | 1965733 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637980684 |
|---|
| Product | flagellar hook-length control protein |
|---|
| Protein accession | YP_587394 |
|---|
| Protein GI | 94314185 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.265097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATA TCAGCCAGCT TATCGGTAAC ACCGCCAACG CCGCCCTCAA GACCCTGACG
CAGTCCAACG CCGCCAGCAC CGCCGCCGCG GACGCCAAGG CATTCCAGGA CGCGCTTTCG
CGCGCGCGTG ATAGCGCCCC GCAGAGCGCG CAACCGGTCG CCAGCAAGCC CAGGGACTCA
AGCCAGACCA GCGCGCCGAA GGAAGACGCA TCGCAAAACA CGCGGCAGCA GACTACGCAG
GCCAGTACGT CGGGCGCTTC CAGCACACCG CAGCAGAAAG ACAACGGCAA GACCAACGCC
ACGACCGGCA AGAAAGACGA CAGCACGCAA GCCAGCGACG ATGGCTCGAC ACCCTCGAGC
GACGCGCAGG CTGCCGCAGC AGCCCTGGCC GCCGCGATGC TGGCACAGCA GGCCGCGCCC
GCCACGACGG CACTGACCGG TGGCGCGGCC GCTGATGCAG CCGCCAATGG TGCCGGATTG
GCCGGAGCCA ACGGCCTCCC GCTCGCCGCT CAGACGGCCG CCACCACGAC CGCTACGCAA
GCAAACCCGG CGACCGACGC CGCCACGCTG CTGGCTCAGG CCGCCGACGC GCAATCGGCC
ACGACTACCG CGGGCACTGC CGCCAAGGGG ACCACGCCAA GCCCGGCGGA CACGCTGGCC
ACGATCGCCC AGCAGCGCGC GGCTGCGCAG AACAGCACGC CGACCGCCGC TGACAAGATC
GCCGCCGCGC TCAACAACCC GGCACAGACG GGCACACAGA CGGGCGCGCA GGACGCACGC
GGCCAGAACG CTGGCCAGCA ACAGACCGGC CTCGGCCACG GCGCGCAACC GACCTTGCAA
GCCGACACGA CGCAAGCCAG CCAGACGCCC ATCGCCACGC CATATGCCAT GGCACAGGCC
AGCGCACGCA CGGGTGAAGG CACCGACACC GGCGCCACGA ATCCGAGCAG CGCTGCCATG
CTGGCATCGG CCCTGTCCGC GCAATCCCAG ACGAACGCCG CACAGGCCAC AGCCGCCGCA
GCAGCGGCAC GCCCGGCAGT CGCACCGAAT CTCGGCGACA GCCAGTGGGC TCAGGCACTG
GGCCAGCAGA TGGTGCGACT CTCCACGCAA GGCAGCCAGA CCGCCGAACT CGACCTGAAC
CCGCCGAACC TCGGCCCGCT CAAGGTCGTG CTCAATGTGG TCAACGATCA GGCCCAGGCC
CAGTTCGTCT CTCCGCACCA GGCCGTGCGC GCCGCGGTGG AAGCCGCGCT GCCGCACCTG
CGCACGTCGA TGGCCGAAGC CGGTATCCAG CTTGGCCAAA CGTCTGTCGG CAGCGATGGT
TTCGCCCAGG CTGGCAACGG CGGCCAGCAG CAACAACGCC AACCGGGCAG CGGCAGCGCA
TTCGCGCAGG CCGCCGGGCT GACGCAGGAT GCGCCAGTCC AGGCAACGGC GGCAGCGCCT
CGCGCACCGC GCGTGCTGGC GCGTGGGGAA GTCGATACGT TTGCCTGA
|
|---|
| Protein sequence | MIDISQLIGN TANAALKTLT QSNAASTAAA DAKAFQDALS RARDSAPQSA QPVASKPRDS
SQTSAPKEDA SQNTRQQTTQ ASTSGASSTP QQKDNGKTNA TTGKKDDSTQ ASDDGSTPSS
DAQAAAAALA AAMLAQQAAP ATTALTGGAA ADAAANGAGL AGANGLPLAA QTAATTTATQ
ANPATDAATL LAQAADAQSA TTTAGTAAKG TTPSPADTLA TIAQQRAAAQ NSTPTAADKI
AAALNNPAQT GTQTGAQDAR GQNAGQQQTG LGHGAQPTLQ ADTTQASQTP IATPYAMAQA
SARTGEGTDT GATNPSSAAM LASALSAQSQ TNAAQATAAA AAARPAVAPN LGDSQWAQAL
GQQMVRLSTQ GSQTAELDLN PPNLGPLKVV LNVVNDQAQA QFVSPHQAVR AAVEAALPHL
RTSMAEAGIQ LGQTSVGSDG FAQAGNGGQQ QQRQPGSGSA FAQAAGLTQD APVQATAAAP
RAPRVLARGE VDTFA
|
|---|
| |