| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5249 |
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| Symbol | |
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| ID | 4042110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1947642 |
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| End bp | 1948754 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980667 |
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| Product | putative L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_587377 |
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| Protein GI | 94314168 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0138908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0448161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG AAAACCTCTC GTTCTCCCCC CTTGCCGGCG TCCGCGTACT GGATTTCTCG
CATGTCATCG CGGGCCCGTT GGCAACGTTC TACCTGTCAC AGCTCGGGGC CGATGTGCTG
AAGATGGAAA ACGCCAATGG CGGCGATGTC ATGCGCAGGA CCGAAACTGG CCGAAAGGGC
TTTCTCGCGC TCAATGCGGG CAAGGACTGT CGTGACATTG ACCTGGGCTC CGAAGCGGGC
CGCGCCGACG CTCTCGCCCT GGCGGCCACG TGCGATGTCG TCGTCGACAA CCTGCGCCCC
GGCGTGCTGG AGCGATTCGG CCTCGGCTTC GAAGCGGTGC GGGCGGTGAA TCCGCGTGTG
GTGTATTGCT CGATTTCGGG CTTTGGTCGC GGCAGTGCCG ACTGGTCGGG CCGCCCCGCA
TACGACCATG TCATTCAGGC GGCCACAGGC ATGACCTTTC TGGCGGGCAA CGAGAACGAC
CCGCCGATCA AGACCGGATT CCCTGTCGTC GACGCCGCAA CGGGCATGCA GGCAGCGCTC
TCCATTCTGG CCGGCCTGCG CGAGCGCGAT CGCTGCGGCT GCGCCATTCA GCTCGACATC
TCCATGACCG GCGCAGCGAT GCAACTCATG TATGGCTTTG CCTGCGAGGC ATTGACGGAT
GGCACTTCGC CCTCTCGCGT GGGCAACCGG GGCTACTCGG GGAGCCCGAC GGCGGACTTC
TTCCCCACGA CCGACGGCTG GATTGCACTC GGCGCCAACA CCCCACGCCA GTTGCTGCGC
CTTCTCGAAG TCCTGGAACT GTCCGAGCTT GCCGCCGACC CGGCCTACTT TGCCGAACCA
CTGGATGCGG AGTCCCCCGC CACCTTCGTG CGCTCACGCG ACCCTGCCGC GCTGAAAACG
ATCATCGCGC AACGCCTGCA AATGCTGCGC GCCGACGAAC TCGAGGAACG CCTCGCCACG
CGCGGGGTAC CCGCAGCGAA GGTACGCAAG CTGGGCGAGT TTGCCGAAGC GGCGCTAGGT
CACGGCCGCA TATCGACTGT CACACTGCGC GATGGCGACA CCGAAGTCAT GTCGCCGGGC
CTGGGCTTCG GTGCCCGGCG ACATCCGGGC TAA
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| Protein sequence | MTTENLSFSP LAGVRVLDFS HVIAGPLATF YLSQLGADVL KMENANGGDV MRRTETGRKG
FLALNAGKDC RDIDLGSEAG RADALALAAT CDVVVDNLRP GVLERFGLGF EAVRAVNPRV
VYCSISGFGR GSADWSGRPA YDHVIQAATG MTFLAGNEND PPIKTGFPVV DAATGMQAAL
SILAGLRERD RCGCAIQLDI SMTGAAMQLM YGFACEALTD GTSPSRVGNR GYSGSPTADF
FPTTDGWIAL GANTPRQLLR LLEVLELSEL AADPAYFAEP LDAESPATFV RSRDPAALKT
IIAQRLQMLR ADELEERLAT RGVPAAKVRK LGEFAEAALG HGRISTVTLR DGDTEVMSPG
LGFGARRHPG
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