| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5247 |
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| Symbol | |
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| ID | 4042108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1945549 |
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| End bp | 1946520 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980665 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_587375 |
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| Protein GI | 94314166 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0614606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.32448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGG TATCGCCTGA GCAACACGGT ATGGGCCTCC ACAGGCCAGC GCGCGCGCAG
CGGCTGGATC GCTTGCGCAT CCGGCATCTA CGCTTTCTGG AACTCGTGGC CGAGCATGGC
TCGTTGACGA CGGCGGCCGC ACAACTGGCG CTCAGCCAGC CTGCCGCAAC CAAGATGCTG
CAGGAGCTGG AATCCGCGTT CGGGGTGGAA CTGGTCGCGC GTACCACGCG CGGCGCGGCA
CTATCCCCTG CGGGACTGGT TGCGCTGGAC CGCCTGCGTA TCGCGCTCAG CGCGCTGGCG
GTGGCGGCTC AGTCAACGAC GGAAACACCC CCCGCTCCCG TGGTGAGGCT TGGCGTACTC
CCGCTGGTTG GCGTGGTGAT CCTGCCGAGA TTGCTGGCGG CAATGGCTGC GCGGCCAGAC
TGCCCAAGAC TCGTCGTGCG TGAATCGACG GTGGGCGGGC TGCTTCGAAT GTTGAGCCGT
GGCGATGTCG ACTGCGTGAT TGGCAGAATC GGCGTGGAGC TGGATGAGCA GGCCGCCAGC
AGGCTGGCGG TGACGCCGCT GTGGCAGGAG CCGCTCGCCA TTGCGTGCGC ACAGGACCAC
CCACTGCGCC GCAGGCGCAA CGTCGGGTTG GCGGAACTGC GCGAGCTGGG TTGGATCGTG
GCGTCACGCG AGGCCTATAC GCGCCAGGTG TTCGACGACA CCTTCCTGTC CGCAGGCCTG
GTGCCGCCCC ATCCCAGGGT CGAGTCGTTC TCGTTCCACA CGAATCTGAG TGTGGTGGCA
AGCAGCGATC TCTTGACCGT CGCACCGGAA AGCGCCGTGG CGCACTATGC GCAACTGGGA
ATGGTGCACC CGGTACGCCA TGATTTTTCG TTCCCGGTGG GGCGCACGGT ATTCATCACG
ATGGCGGAGA TGGGGGCCTG GCCCGGCATT ACGCTGATCC GGGATGCCTT GGCTGATCTG
ACTGTCCCCT GA
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| Protein sequence | MTRVSPEQHG MGLHRPARAQ RLDRLRIRHL RFLELVAEHG SLTTAAAQLA LSQPAATKML
QELESAFGVE LVARTTRGAA LSPAGLVALD RLRIALSALA VAAQSTTETP PAPVVRLGVL
PLVGVVILPR LLAAMAARPD CPRLVVREST VGGLLRMLSR GDVDCVIGRI GVELDEQAAS
RLAVTPLWQE PLAIACAQDH PLRRRRNVGL AELRELGWIV ASREAYTRQV FDDTFLSAGL
VPPHPRVESF SFHTNLSVVA SSDLLTVAPE SAVAHYAQLG MVHPVRHDFS FPVGRTVFIT
MAEMGAWPGI TLIRDALADL TVP
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