| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5239 |
|---|
| Symbol | |
|---|
| ID | 4042100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1937944 |
|---|
| End bp | 1938723 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637980657 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587367 |
|---|
| Protein GI | 94314158 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.768643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.611643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA ACCTTGCCAG GCACGAAGCC GAACTCGAAT CCCAGGGTTG GACAGTGGTC
CCGCGACTGA TCCATGAGGA ACTCGTCGGC GCGCTGAACC ACGCCCTTGT TCCGTCGCTG
AACAAGCGTG ACGCGATCCG CACGGCAAAT GGTCTGATGG AAAACTGTCA GGGCACCGCT
CACCACGTGC TTTCCGACGA CCGCTGCTAT GTCGAACTGC TGGCGAAATT CGAAGCGCTC
GATCCCATCG TCAAATGGTT CTTCGGCGGC AACTACATCC TGAACTCGTA CGGCGGCTTC
ATCAACGACG GCAAGACCTA CGCCCACGAC GTTCACAGGG ATATCCGCTT TCATTCGAAC
GCCAAGCGCT TCATGCTGAA TACGCTGGTG ATGCTCGACG AGTTCACCGA GCCGAATGGC
GCGACCCATA TTCTTTCCGG TTCCCAGCAT CAGCCCGAGA GGCCGTCCAA CGACACGTTC
TTTCGTGATG CGGCGCGCGT GACAGGCGAG CGCGGCTCGG TCTTGCTGTT CGACTCCCGA
ATCTGGCACG CCGCCGGAGA GAACACGACA AATCTTCCCA GAAGGGCGTT GACGCTGACG
TTCACCTGCC CCTTCTTCAA ACCGCAGCTC GACTATCCGA GGCTCATGGC CAGCTCCGGC
GTCTCGACCC TCACGCCATT CCTCCGGCAG GTGATCGGTT TCAACGCCCG GGTGCCCGCG
TCCCTCGAGG AGTTCTACGT ACCGGTCGAG CAGCGCTTCT ATCAACGCGG ACAGGACTGA
|
|---|
| Protein sequence | MNTNLARHEA ELESQGWTVV PRLIHEELVG ALNHALVPSL NKRDAIRTAN GLMENCQGTA
HHVLSDDRCY VELLAKFEAL DPIVKWFFGG NYILNSYGGF INDGKTYAHD VHRDIRFHSN
AKRFMLNTLV MLDEFTEPNG ATHILSGSQH QPERPSNDTF FRDAARVTGE RGSVLLFDSR
IWHAAGENTT NLPRRALTLT FTCPFFKPQL DYPRLMASSG VSTLTPFLRQ VIGFNARVPA
SLEEFYVPVE QRFYQRGQD
|
|---|
| |