| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5236 |
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| Symbol | vioA |
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| ID | 4042097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1935098 |
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| End bp | 1936243 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637980654 |
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| Product | aminotransferase DegT/DnrJ/EryC1/StrS family |
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| Protein accession | YP_587364 |
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| Protein GI | 94314155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00401376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.448242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCCA GCCTTCCGTC GGAATCCGTG CGCGCCCTGC TCGAGGACCG CATCTACGTC
ACCCAGCCAC ACCTGCCTCC GCTCGACGAG TTCCTGCCCT ATCTGCAGCA GATCTGGAAC
TCGCGCGTGT TGACCAATGG CGGGCCGTTT CACCAGCAGT TCGAGCGTGA ACTGTGCGAG
TACCTTGGCG TCCCTTACCT GTCGCTGTTC GCCAATGGCA CGCTCGCGCT CGTGACGGCG
CTACAGGCGC TGCGGATCAC GGGAGAGGTC ATCACGACGC CATACTCCTT TGTGGCGACG
GCGCACTCGC TGCTGTGGAA CGGCGTCAAG CCCGTCTTCG TCGACATCGA CCCGCATACG
ATGAATCTCG ATCCGGCAAA GATCGAGGCC GCGATCACAC CGCAGACAAC GGCGATCATG
CCCGTGCATT GCTACGGCCA CCCCTGCGAT GTCGACGCGA TCCAGAAGAT CGCGGACAAC
TACAACCTCA GGGTGATCTA CGATGCCGCC CATGCCTTCG GCGTCCGTAA CGAAAGCGGC
AGCATCCTGA AGCACGGCGA CCTGTCGATT CTCAGCCTGC ACGCCACCAA GGTCTTCAAC
ACGTTCGAAG GTGGCGCCAT CATCTGCCCC GATGCCAAGA CAAAGCAGCG CATCGATCAT
CTGAAGAACT TCGGTTTTGT CGACGAAGTC ACCGTCGTCG CTGCCGGCAT CAACGGCAAG
ATGAGTGAAA TCAACGCTGC GTTTGGGCTG CTGCAGTTGC AGCACATCGA CGAGGCGCTC
GAGCGCCGCA AGGCGATCGA TGCACGCTAT CGCGAACTGT TGCGCAACAT CCCCGGCATT
CGTTGCCAGG CGGATGCCGG CGAAACCACA GCCAACTACG CGTACTTCCC CATTCACGTC
GAAGCTGACT ACCCGATCAG CCGGGATGCC CTGTTTGACA AGTTCCGCGA GCAAGGTATC
TTCGCTCGGC GCTACTTCTA TCCGCTGATC TCGGATTTCC CGATGTATCG CGGCCTGCCG
TCCGCCAGCC GCCATAACTT GCCCATTGCA TCGGAGGCGG CGCTGAAGGT GCTGTGCCTG
CCGATCTATC CGGCGCTCAC TGAAGAGCAA GTTCAGCGCG TCGTGAGCAT CATCGCGGAG
CATTGA
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| Protein sequence | MTASLPSESV RALLEDRIYV TQPHLPPLDE FLPYLQQIWN SRVLTNGGPF HQQFERELCE
YLGVPYLSLF ANGTLALVTA LQALRITGEV ITTPYSFVAT AHSLLWNGVK PVFVDIDPHT
MNLDPAKIEA AITPQTTAIM PVHCYGHPCD VDAIQKIADN YNLRVIYDAA HAFGVRNESG
SILKHGDLSI LSLHATKVFN TFEGGAIICP DAKTKQRIDH LKNFGFVDEV TVVAAGINGK
MSEINAAFGL LQLQHIDEAL ERRKAIDARY RELLRNIPGI RCQADAGETT ANYAYFPIHV
EADYPISRDA LFDKFREQGI FARRYFYPLI SDFPMYRGLP SASRHNLPIA SEAALKVLCL
PIYPALTEEQ VQRVVSIIAE H
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