| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5233 |
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| Symbol | cydB |
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| ID | 4042094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1930532 |
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| End bp | 1931569 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980651 |
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| Product | cytochrome d ubiquinol oxidase subunit II |
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| Protein accession | YP_587361 |
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| Protein GI | 94314152 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.507916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG CCACGATGCA CGATCTTTCC CAGCCGGCCG GCTGGATGCC GCTGGTGTTT
CTGGCGTTGA TGGGCTTGTC GATGCTGATC TACGTGATCC TTGACGGCTA CGATCTTGGC
GTGGGCGTGC TGCTGCGGCG CGCCGACGAC GTCGACAAGG ACACCATGAT CGCCTCGATC
GGCCCGTTCT GGGACGCCAA CGAAACGTGG CTCGTGCTCG GCGTGGGCCT GCTGCTGACC
GCGTTTCCGA TGGCGCACGG CGTCATCCTG ACGCAGCTGT ACCTGCCCGT GGCGCTGATG
CTGGCCGGCC TGATCATCCG TGGCGTCGCC TTCGACTTCC GCGTCAAGGC ACGGGACCCG
CACAAGCCCT GGTGGAACTT CGCGTTCTAT GCGGGCTCGC TGCTGGCCAG CTTCTCGCAG
GGTCTGATGC TCGGCCTGTA CATCACCGGC TTCCGCTACG ACCTTCCCAA CCTGCTGTTC
GCCGTGGCCG TTGGCCTGTG CCTGGTGGCC GGCTACTGCC TGCTGGGCGC AAGCTGGCTG
ATCATGAAGA CCACGGGCAA CCTGCAGTTG CGCGCGATCT ACTGGGCGCG CCGCAGCCTG
TGGCTCACCG CGATTGGCGT GGCCGCCATC TCGATCGTCA CGCCGATGGT CAGCGAGCGC
ATTTTCGAGA AGTGGTTCTC CCTGCCGAAC ATCATCCTGC TGGCGCCGAT TCCGCTGCTG
ACAATGGTGC TGTTCGTGGT CATCGAGCGA CTGCTGCGCC GGATGCGTGA CCTGCACGCG
AACGGCAACG ACCGCTGGTG CTGGGTGCCG TTCGTGGGCA CCGCCGTGAT CTTCCTGCTG
GCGTTCAACG GCCTGGCCTA CAGCCTGTTC CCGTACCTCG TGGTCGATCG CATCGACATC
TGGCAGGCGG CCAGCGCGCC GGAATCGCTG ATGGTGATCC TGATCGGCGC GGTGATCGTG
CTGCCCACGA TCCTGGGTTA CACGGCCTAC GCGTACCGTG TATTCTGGGG CAAGGCCACG
GACCTGCGTT ACGACTGA
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| Protein sequence | MNPATMHDLS QPAGWMPLVF LALMGLSMLI YVILDGYDLG VGVLLRRADD VDKDTMIASI
GPFWDANETW LVLGVGLLLT AFPMAHGVIL TQLYLPVALM LAGLIIRGVA FDFRVKARDP
HKPWWNFAFY AGSLLASFSQ GLMLGLYITG FRYDLPNLLF AVAVGLCLVA GYCLLGASWL
IMKTTGNLQL RAIYWARRSL WLTAIGVAAI SIVTPMVSER IFEKWFSLPN IILLAPIPLL
TMVLFVVIER LLRRMRDLHA NGNDRWCWVP FVGTAVIFLL AFNGLAYSLF PYLVVDRIDI
WQAASAPESL MVILIGAVIV LPTILGYTAY AYRVFWGKAT DLRYD
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