Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5231 |
Symbol | |
ID | 4042092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1928526 |
End bp | 1929170 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980649 |
Product | hypothetical protein |
Protein accession | YP_587359 |
Protein GI | 94314150 |
COG category | [K] Transcription |
COG ID | [COG1510] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.468748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTCT CGCCCCTGAT CCAGCGCTTT GTTCTCCACT TCGGGGAGAT GGGCAGTCGC TGGGGGATTA ACCGAACGGT TGGTCAGATT TACGCCCTGC TCTTCACTGC CTCGCGCCCC CTCAACGCCG ACGAAATCGC CGAATCTCTT GGATTTTCAC GCTCGAATGT CAGCATCGGC CTGAAGGAAC TGGAATCCTG GAGCCTGGTG CGGCTGTCGC ACCAGCCCGG CGACCGGCGC GAATATTTCT CCGCGCCCGA CGACGTCTGG GCCATCTTCC GCACGCTGGC CGAGGAACGC CGCCGGCGCG AGATCGATCC CACGTTGTCG ATGCTGCGCG AAGTGCAGCT CGAAACGCCG ACATCGCCCG AGGATCTCCA TGCGCAGGCG CGCATGAAGG AGATGTACGG GCTGATTTTC CTGGTCACCA CGTGGTTCGG CGACATGCAG AAGCTTGACG TCGCCACGCT GGAAAAGCTG ATGCGCCTGG GCTCGCGCGT CACCAAGCTG CTCGACGTGA AGGACCGTCT GACCTCTGCC ATTGGTATCG GCAGGGAGAA GGCCTCCAAC AAGGCATCGA GCAAGCCAGC CCCCCGGGAA GCCGCCAAGG CCCCCGCGAA GTCCGCCCGT TCCCGCAAGG AGTAA
|
Protein sequence | MQLSPLIQRF VLHFGEMGSR WGINRTVGQI YALLFTASRP LNADEIAESL GFSRSNVSIG LKELESWSLV RLSHQPGDRR EYFSAPDDVW AIFRTLAEER RRREIDPTLS MLREVQLETP TSPEDLHAQA RMKEMYGLIF LVTTWFGDMQ KLDVATLEKL MRLGSRVTKL LDVKDRLTSA IGIGREKASN KASSKPAPRE AAKAPAKSAR SRKE
|
| |