| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5198 |
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| Symbol | |
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| ID | 4042059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1893352 |
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| End bp | 1894305 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637980616 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_587326 |
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| Protein GI | 94314117 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00805191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0793697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGG CGTGCATGAA AGACGAAGGG GAGGTGATCG TGCTGACGCG GCTGCCACTG
GATCAGGACT GGCTGCGGGC GCATGCGCCG CGTTACCGGT TCGTGCCGTG GACAGCGGTG
GACGAGGCGC AGCGTGTGCA GGCGCGCGCA GTGCTGACCA ATGGTTCCAC GGGACTGACC
GGGGCCGAGA TGGCCGCATT GCCGGCGCTG GAACTGGTCG CGAGCTTTGG GGCCGGCTAC
GAGAACATCG AACGGGATGC GGCGCGGATG CGTGGCGTGC GCGTGTGCCA TGCGCCGGAT
ACCAATAGCC AGGTCGTGGC GGACCACGCG CTGGCGATGA TGCTGGCGTG GTCGCGCGGC
ATTGCGATGC TCGATCGCGG CCTGAAGGCG GGGCAATGGG ATGCGCTGCG CGCGCCGCGG
CCGGGCGTGC GCGGCAAGAC CCTGGGCATC GTCGGGCTTG GCAATATCGG CCAGCGTCTG
GCCGCGCTGG CAGAGGCCGT GGGCATGCGC GTGGCCTACC TGCGCCGCAG TGGCGCTCTG
CAGCCGAACC GCACGCCGTA TGGCGACGTG CGTTCGCTGG CGGCCGCAAG CGATGTGTTG
GCATTGACCT GTCCCGGCGG TCCGGCCACT CGGCATCTGG TCGACGCGGA GGTACTGCGC
GCGCTGGGTC CCGACGGCCT GCTTGTCAAC GTGGCGCGTG GCAGCGTGGT GGATACCGAG
GCGCTGGTAC AGGCACTGCG ACGCGGCGAG CTGGGTGGTG CCGCACTCGA CGTGTTGGAA
GCCGAGCCCC TGGTGCCCGA GGCGTTTCGC GAGATGGATC AGGTCATCCT GACGCCGCAC
ATGGCGGGCC GTTCGCCCGA AACGCGCGTG GCCCAGCACG AGGCGCTGCT GCGTAATCTG
GACGGATGGT TCCGTCACGC TGCGCCGGCC CATCCGGTCG ATCTGGCAGG CTGA
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| Protein sequence | MSLACMKDEG EVIVLTRLPL DQDWLRAHAP RYRFVPWTAV DEAQRVQARA VLTNGSTGLT
GAEMAALPAL ELVASFGAGY ENIERDAARM RGVRVCHAPD TNSQVVADHA LAMMLAWSRG
IAMLDRGLKA GQWDALRAPR PGVRGKTLGI VGLGNIGQRL AALAEAVGMR VAYLRRSGAL
QPNRTPYGDV RSLAAASDVL ALTCPGGPAT RHLVDAEVLR ALGPDGLLVN VARGSVVDTE
ALVQALRRGE LGGAALDVLE AEPLVPEAFR EMDQVILTPH MAGRSPETRV AQHEALLRNL
DGWFRHAAPA HPVDLAG
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