Gene Rmet_5196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5196 
Symbol 
ID4042057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1890948 
End bp1892885 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content65% 
IMG OID637980614 
Producthypothetical protein 
Protein accessionYP_587324 
Protein GI94314115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0675413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.16071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCATCCG CCACGCCTTC TGAACACACC CGCTTGCTGC CGGCGCTGCG GATGTGGCGC 
CGGCTGGAAC CACATCGCCT GATCAACAAG GAGTCAGTCA TGCATCATCC CCAACGCCGG
CATCGCCACA CGGCCCTGAC CAGGGGCTGC GCTCTGGCAA TCGCCCTGAT GTCCGCGGCC
CTGCTGCCGC TGGCCGCACG GGCCGCCGGC GCCGAATCCG CCGCTCCCGC TGCCGCCACG
ACTGCCGCTA CCCCTGCCGT CACGCCGAAC GCAGGCCAGG TCTCGCCGGG CACGCCCAAC
GTCAAGGACC CGTACCTGGC AGGCTGGCTG CGCCTGACCC CCGACCGTCG GCCCACCGCG
CTCAAGGCCG GCGTCGACTA CGGCATGGAC CCGGCCACCG GCGAGTTCAT CTGGCCCAAG
GCCACGCAGG AAGTCCACAA CGGCCAACGC TTCCCTGGCG AGATGACCAC GTGGGACAAG
AACACCTACT CGAAGAACGT CAAGGTTCTC GCCTTCTACC CGGGTGTCGG CTCGCCGTTC
CATGCCTGGA ACAACATTAT CGACTTCGAA GGCAAGCGAT ACCTGTACAT CCATGATCGC
GACTACCTGC GCATCATGGA CGTGACCGAC CCCGCTCACG GCAAGGTGGT CTACTCGCAA
GGCGGTGTCT GGGGTCCCAA GGGATCGAGC GAAAAGTATG ACCCGAACAC GGTGCAGGAC
TATCTCGGTG GCGCGACCAT CGCCTGGAGC AAGAAGCTGG GCAAGCCGGT CATGGTGGCC
TCGTACGAGA TCGGCCGCTA CGGCCTGATG CAAGAGAAGA TGGAGCAGCC CGACAAGGTC
GCGGCTCAGC GCCACTACAA CTCGCTCAAG GGCTTCAAGG TGTTCGTCAT GGACGGCCCG
CTGCCCAGCC AGTGGAGACT GCTGGCAACC CGCACCACGG ACACGCAGCA TCCGGATGCG
CCAGTGGGCC AGCAACAGGG TTCCGGCTCG CTGGATGCGC CCGAGTACTA CGGCGGCAAG
TACATGATCG TTGCATCGGC GCCCGACGAC AGCTACGCCC TGACCGAATA CCCCAACTAT
CTGTACTCGC CCGGATACCA GGTCTGGGAC ATGTCGGACC CGGCCAATCC TACCTTCGTG
TCGCAGGTGG CGGTACCGGG GCAGATCCTC GGCAACGCGG AGCATGAACA GACCTACCTC
ATGAACCCGC GCGCGGGTAA CCGCACCTCG TGGATGGGGG CACGCAACCC CATCTTCCTG
CCCAAGTCGC TCGAAGCAGG CGGCAAGATC GGCTTCGGCG CGATGGGTGG TCTTGGGTTC
TATGCGTTCG ACCTGTCCAA CCCTGCCCGT CCGAAGATGC TCGGCAACGT CAACACGCCG
CCGAGCTACG CCGGCACCGA GTTCGACAAT GCCGACGTAA GCCAGTACGA GCGCACGGGC
TACGTGTTCA CCAACGGCTA TCCGATGAAC CGGGATTGCT ACGAGCCGTA CAAGGACATC
TTCGTCGTCG ACGCGCGCGA TCCCGCGCGC CTCAAGGTGG CGGCCAAGCT GCCGCGACCC
GAGGTCCCGG CCGGCGCGCC CTTCACCAGC TTCTGCCAGC GCGGCGGCAA CTTCGGGCCC
AAGCGCGCCA ACGCCATCGG TCAGCCCGGC GGCTGGCGCC AGGGCATCGT GCCGTACTCG
TTCTATAACG CCGGCGTGCA GATCTATGAC GTGAAGAACC CGGCGCAGCC CACCATCGCC
GGCTACTTCA TCCCGCCGCT GGCCGACGAG ACGCAATTGC CGTCTTACAC CCTGGGCAAG
GGCGTGTTCG CGATCTACAC GGAGTACGAC CGCAACATCA TCTGGGCCTT TACCGAAGAC
GGCGCCTACG CACTGTCGAC GCCGTTGCTC GGCGAACCCG TGCTCGGCGC GCCGGCAAAG
CCCTGGCCGC GACGCTAA
 
Protein sequence
MASATPSEHT RLLPALRMWR RLEPHRLINK ESVMHHPQRR HRHTALTRGC ALAIALMSAA 
LLPLAARAAG AESAAPAAAT TAATPAVTPN AGQVSPGTPN VKDPYLAGWL RLTPDRRPTA
LKAGVDYGMD PATGEFIWPK ATQEVHNGQR FPGEMTTWDK NTYSKNVKVL AFYPGVGSPF
HAWNNIIDFE GKRYLYIHDR DYLRIMDVTD PAHGKVVYSQ GGVWGPKGSS EKYDPNTVQD
YLGGATIAWS KKLGKPVMVA SYEIGRYGLM QEKMEQPDKV AAQRHYNSLK GFKVFVMDGP
LPSQWRLLAT RTTDTQHPDA PVGQQQGSGS LDAPEYYGGK YMIVASAPDD SYALTEYPNY
LYSPGYQVWD MSDPANPTFV SQVAVPGQIL GNAEHEQTYL MNPRAGNRTS WMGARNPIFL
PKSLEAGGKI GFGAMGGLGF YAFDLSNPAR PKMLGNVNTP PSYAGTEFDN ADVSQYERTG
YVFTNGYPMN RDCYEPYKDI FVVDARDPAR LKVAAKLPRP EVPAGAPFTS FCQRGGNFGP
KRANAIGQPG GWRQGIVPYS FYNAGVQIYD VKNPAQPTIA GYFIPPLADE TQLPSYTLGK
GVFAIYTEYD RNIIWAFTED GAYALSTPLL GEPVLGAPAK PWPRR