Gene Rmet_5157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5157 
Symbol 
ID4042018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1855912 
End bp1856724 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID637980575 
ProductIclR family transcriptional regulator family 
Protein accessionYP_587285 
Protein GI94314076 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.178895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATCAC TGCCACCTAC CGCACCCGTC ACGGCGGGCG AGAGCGAAGG CGAACAGGAA 
GGTCGCCTGG TGAGCGCGCT CGCACGCGGC ATCGGCATCC TTGGCTGCTT TTCGACCACC
GTCCAGGAAC TGTCCGGCAA GGAACTGATG GAGCTGACGG GTCTGCCCAA GCCCACGCTG
TTCCGCCTGC TCGACACGCT GTGCGAACTC GGCCTGCTGC GCTATTCCGA GCGGCTATCG
AAATACGTGC CCGGACTCGG CCTGCTGAAC CTGGCCGCGC CGACGCTCGC CCGCATGACG
ATCCGCCAGC TGGCCCGCCC TCTGATGCAG GAACTGGCAG ACCACATCGA AGGACAAGTC
CAGCTACTCG CGGGGATTGG CACCAATCTG AGCTACGTCG AAGTGGCGCA GGGTGCAGGT
TCGCAGTTGT TCCGCTCTGA AATCGGGATG CGCGTCTCGC TGTCGCGCGC GGCATCCGGC
CGGGCGTACC TGTTGATGCT GTCCGAGTCC GAACGCAAGG CGTGGCTCGA CGGCTTCGCG
CGGCGCGACC CATCGCGCAA GGAATGGCTC GACGAGCGCC TTGCCACGGC ACAACGCGAT
CTGAGCGAGC AAGGCTTCTC GCGCAGCTAC GGCGACCTGC ACCGCGAGAT CGAAACCATC
GCCGTGCCGA TGCAGAAACG CCGCGATGGC GAAGCCTGGG TGCTCGCTGC CGCCGTGCCG
ATCTACAGCG AACAGTGCAA ACGGCTAAAG GAAGACCTCG GCCCGCGCCT GCTGACGCTC
ATGCGCAATG TGGAGGCATC GCTGGGCGCA TAG
 
Protein sequence
MTSLPPTAPV TAGESEGEQE GRLVSALARG IGILGCFSTT VQELSGKELM ELTGLPKPTL 
FRLLDTLCEL GLLRYSERLS KYVPGLGLLN LAAPTLARMT IRQLARPLMQ ELADHIEGQV
QLLAGIGTNL SYVEVAQGAG SQLFRSEIGM RVSLSRAASG RAYLLMLSES ERKAWLDGFA
RRDPSRKEWL DERLATAQRD LSEQGFSRSY GDLHREIETI AVPMQKRRDG EAWVLAAAVP
IYSEQCKRLK EDLGPRLLTL MRNVEASLGA