Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5157 |
Symbol | |
ID | 4042018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1855912 |
End bp | 1856724 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980575 |
Product | IclR family transcriptional regulator family |
Protein accession | YP_587285 |
Protein GI | 94314076 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.178895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATCAC TGCCACCTAC CGCACCCGTC ACGGCGGGCG AGAGCGAAGG CGAACAGGAA GGTCGCCTGG TGAGCGCGCT CGCACGCGGC ATCGGCATCC TTGGCTGCTT TTCGACCACC GTCCAGGAAC TGTCCGGCAA GGAACTGATG GAGCTGACGG GTCTGCCCAA GCCCACGCTG TTCCGCCTGC TCGACACGCT GTGCGAACTC GGCCTGCTGC GCTATTCCGA GCGGCTATCG AAATACGTGC CCGGACTCGG CCTGCTGAAC CTGGCCGCGC CGACGCTCGC CCGCATGACG ATCCGCCAGC TGGCCCGCCC TCTGATGCAG GAACTGGCAG ACCACATCGA AGGACAAGTC CAGCTACTCG CGGGGATTGG CACCAATCTG AGCTACGTCG AAGTGGCGCA GGGTGCAGGT TCGCAGTTGT TCCGCTCTGA AATCGGGATG CGCGTCTCGC TGTCGCGCGC GGCATCCGGC CGGGCGTACC TGTTGATGCT GTCCGAGTCC GAACGCAAGG CGTGGCTCGA CGGCTTCGCG CGGCGCGACC CATCGCGCAA GGAATGGCTC GACGAGCGCC TTGCCACGGC ACAACGCGAT CTGAGCGAGC AAGGCTTCTC GCGCAGCTAC GGCGACCTGC ACCGCGAGAT CGAAACCATC GCCGTGCCGA TGCAGAAACG CCGCGATGGC GAAGCCTGGG TGCTCGCTGC CGCCGTGCCG ATCTACAGCG AACAGTGCAA ACGGCTAAAG GAAGACCTCG GCCCGCGCCT GCTGACGCTC ATGCGCAATG TGGAGGCATC GCTGGGCGCA TAG
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Protein sequence | MTSLPPTAPV TAGESEGEQE GRLVSALARG IGILGCFSTT VQELSGKELM ELTGLPKPTL FRLLDTLCEL GLLRYSERLS KYVPGLGLLN LAAPTLARMT IRQLARPLMQ ELADHIEGQV QLLAGIGTNL SYVEVAQGAG SQLFRSEIGM RVSLSRAASG RAYLLMLSES ERKAWLDGFA RRDPSRKEWL DERLATAQRD LSEQGFSRSY GDLHREIETI AVPMQKRRDG EAWVLAAAVP IYSEQCKRLK EDLGPRLLTL MRNVEASLGA
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