| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5151 |
|---|
| Symbol | |
|---|
| ID | 4042012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1849605 |
|---|
| End bp | 1850513 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637980569 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_587279 |
|---|
| Protein GI | 94314070 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.606064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.58822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTAC GTCGCATCAG GCACTTTGTC GTACTTGCCG AGACTCTGAA CTTCCGGCGC
GCCGCCGAGC GGCTGCATAT CGCCCAGCCG GCCCTGACCG TCTCCATACA GAAACTCGAA
GCAGAGCTGG ACACCACCTT GTTCCTGCGC GATGCCAGAG GCGTGGCGCT GACCGCCAGC
GGGCGGGTCG CGTTGCTGGA GGCAAAGCGC ATCCTGTTCC ACGCTGGCCA GTTCAGCGAG
CGGGTACACG CAGCCGCCAG TGGTCTGGGT GGCACATTGC GCGTGGGATT CGTCGGCTCC
ACGACGTATC AGGTACTCCC GCGACTCGTC TCGCGCTTCC GCGAGGAATA TCCGGGCATC
GAACTCGTAC TGAAAGAGGC AACGTCGACC AGCATTCTTC GGAGCCTGGA GGAGGAAGTC
CTGGATGTCG GCCTCATCAG GACGCCATTG ATGTCCAGGG GCACTGCCAC GCTGATTTCC
CTGCAGGAAG ACCGGTTCGT TGCCGCGCTG CCACGGCGCA ATCCGCTGGC GGCAAAGCAA
CCGCTTACGC TCGCCGACCT TGCGCAAGAG CGGTTCGTCA TGTATGCCCA GACCGAAGCA
TCGGGCCTGC ACGCCGCTGC GATGGCGGCA TGTCAGACCG CCGGATTCCT TCCCCGGATC
ACGCAGGAAG CCACGCAGAT CCAGACGGTA TTGGCACTGG TGGAAAGCGG CCTTGGCGTC
GCGTTGGTCC CGTCGATCAT GCGTCGATTC GGCAGTGACA AGCTGGTCTA TTCGACACTG
GCCAACTATC CCAACACCAC GAGCATCGGC ATCGCCCTGG CCTTTTCCCC GCACGCCGAT
GGTCCGGCCA TCAGGCATTT CCGCGAAGTG GCGATTGCGG AATTTGCCGG CGACGCGCCG
GCCGCGTAG
|
|---|
| Protein sequence | MDLRRIRHFV VLAETLNFRR AAERLHIAQP ALTVSIQKLE AELDTTLFLR DARGVALTAS
GRVALLEAKR ILFHAGQFSE RVHAAASGLG GTLRVGFVGS TTYQVLPRLV SRFREEYPGI
ELVLKEATST SILRSLEEEV LDVGLIRTPL MSRGTATLIS LQEDRFVAAL PRRNPLAAKQ
PLTLADLAQE RFVMYAQTEA SGLHAAAMAA CQTAGFLPRI TQEATQIQTV LALVESGLGV
ALVPSIMRRF GSDKLVYSTL ANYPNTTSIG IALAFSPHAD GPAIRHFREV AIAEFAGDAP
AA
|
|---|
| |