| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5140 |
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| Symbol | |
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| ID | 4042001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1837440 |
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| End bp | 1839017 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980558 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_587268 |
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| Protein GI | 94314059 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.24744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.25513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGG AATACCTCGC GACGCTGCCC AGCGCGATTC GCCACTTCGC CCGGGAGCGG
GCCGGGGCCA TTGCGTACGC CTTCGAAGGC CGCGAGACCA CGTTTGCCGA TTTCGATCGC
CATACGGATC GCGTGGCGCA GGCCCTGCTG GCCGACGGCG TGAAGGCTGG CGACCGCATC
GCCTATGTCG GCAAGAACAG CGACCACTAT TTCGAACTAT TCTTTGGCGC GGCCAAGATG
GGGGCCGTCA TTGCACCGGT GAGCTGGCGG CTGGCGGGGC CCGAAATCCA GTACATCGTC
TCGCACTGCG ACGCGACGCT GGTCTTCGTC GGCCCCGAGT CATCGGCATC GGTTCGCAAC
CTGCTGCCAG CGCTGCCACT GGTGCGCCGC GCCGTGGCGA TGGAGGGCGG GGAGCCAGAC
TGGCCGGCCT ACACGGAATG GCGCGACGCG TGCCCGGATA CACCACCGGC GCACGAAGCG
AAGCCCGCCG ACGTGGTGCT GCAGCTCTAC ACGTCTGGCA CTACCGGACG TCCCAAGGGC
GTGATGCTGA TGCATCGCAA CCTGACCAGT GGTACCGAGA TCTCGATGCG CGAAGGTGCC
GACTGGTCGC AATGGAACGA CGAAGATGTG TCGCTGGTGG CCATGCCGGT GGCGCATATC
GGCGGTTCGG GCTGGGGCGT GCGCGGTGTT CTTGTCGGCT GCAAGGGTGT CGTGGCGCGC
GAATTCGATC CGGGCAAGGT GCTCGACTAT ATCGAGCACG ACCGCATCAG CAAGCTGTTC
ATGGTGCCGG CTGCGATGCA GATCGTGCTG CGTGATCCGC GCGCGCGCCA GGTGGACTAT
TCACGCCTCA AGCACATGCT GTACGGTTCG TCGCCGATTC CCGCAGCGCT GCTGCGTGAG
GGCATGGCGG TGTTTGGCTG CGGCTTCGTG CAGCAGTACG GCATGACGGA GACCACGGGC
ACGATCGTGG CGCTGCCGCC GGAAGATCAT ACGCCCGCCG ATGTCCCGCG CATGCGCGCC
GCCGGCAAGG CCATGCCCGG TAGCGAGGTG GCGGTGGTCG GGCCGGATGG CCAGAGGCTG
GCTGCCGGCG AGGTGGGCGA AGTGGTGATC CGCTCGCCGC AGAACATGGC GGGCTACTGG
AAGCAGGAGG AAGAGACCGC CCGCACCATC GACGCCGACG GCTGGCTGCG CAGTGGCGAT
GCTGGCTACA TGGACGCGGA CGGCTACCTC TATATCCACG ACCGGGTCAA GGACATGATC
ATCAGCGGCG GGGAGAACAT CTACCCGGCC GAGGTGGAGA GCGCCATCTA CGGCCACCCG
GCCGTTGCCG ACGTGGCCGT GATCGGTGTG CCGGACGAGC GGTGGGGTGA GGCGGTCAAG
GCGATGGTGG TGCTGCGCCC GGGTGTGGCC GCTGACGCCG ACAGCATTCT GGGCTGGGCG
CGCGAGCGTA TCGCGGGTTT CAAGGTGCCC AAGAGCATCG ACTTCATCGA TGCCATGCCG
CGCAATCCGT CGGGCAAGTT GCTGCGTCGG GCGCTACGGG AACCGTACTG GACGGGCCGC
ACCCGGCAGG TGAACTAG
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| Protein sequence | METEYLATLP SAIRHFARER AGAIAYAFEG RETTFADFDR HTDRVAQALL ADGVKAGDRI
AYVGKNSDHY FELFFGAAKM GAVIAPVSWR LAGPEIQYIV SHCDATLVFV GPESSASVRN
LLPALPLVRR AVAMEGGEPD WPAYTEWRDA CPDTPPAHEA KPADVVLQLY TSGTTGRPKG
VMLMHRNLTS GTEISMREGA DWSQWNDEDV SLVAMPVAHI GGSGWGVRGV LVGCKGVVAR
EFDPGKVLDY IEHDRISKLF MVPAAMQIVL RDPRARQVDY SRLKHMLYGS SPIPAALLRE
GMAVFGCGFV QQYGMTETTG TIVALPPEDH TPADVPRMRA AGKAMPGSEV AVVGPDGQRL
AAGEVGEVVI RSPQNMAGYW KQEEETARTI DADGWLRSGD AGYMDADGYL YIHDRVKDMI
ISGGENIYPA EVESAIYGHP AVADVAVIGV PDERWGEAVK AMVVLRPGVA ADADSILGWA
RERIAGFKVP KSIDFIDAMP RNPSGKLLRR ALREPYWTGR TRQVN
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