Gene Rmet_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5123 
SymbolphaB3 
ID4041984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1818056 
End bp1818802 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID637980541 
Productacetoacetyl-CoA reductase 
Protein accessionYP_587251 
Protein GI94314042 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.753936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG GACGCATTGC GGTAGTGACG GGGGGCATGG GTGGTCTGGG CGAAGCCATC 
GCCGAAAGGC TGCTGAGCGA CGGATTCCGC GTGGTCGTCA CGCATTCGCT TGGCAACGAT
CATGTCGCGA CCTGGCTGCG CGAGCACAGT ACGCAGCAAC GCGAGTTCGT GGCCTACCCG
GTAGATGTCG CCGACTTCGA ATCCTGCCAG CAATGTGCGG CCAGGATATT GTCCGAGGTG
GGCCCGGTGG ATGTCCTGAT CAACAATGCC GGCATCACGC GCGATTCGAC CTTGCGCAAG
ATGACGCACG AGGCCTGGCG CGCCGTGATG TCTACCGACC TCGATTCGGT GTTCAACATG
ACCAAGCCGT TCTGCGAAGG CATGGTGGAG CGTCGCTGGG GCCGGATCGT GAACATCTCA
TCGATCAACG GCTCGAAGGG CGCGTTTGGC CAGACTAACT ATGCAGCGGC AAAGGCCGGC
ATCCACGGAT TCAGCAAATC GCTGGCGCTG GAGCTGGCCA GCAAGGGCGT GACGGTCAAC
ACCGTTTCTC CCGGTTATCT CGATACGAAG ATGGTGCGGG CAGTGCCGCA GGACGTGCTC
GACCAGCACG TGATTCCGCA GATTCCGGTC GGCCGCCTGG GTCAGCCGAA GGAAGTGGCC
GCGCTGATCA GTTACCTCTG CTCGGACGAT GGCGCGTACG TGACCGGCGC CAACCTTGCC
ATCAATGGTG GCCAACATAT GGATTGA
 
Protein sequence
MSSGRIAVVT GGMGGLGEAI AERLLSDGFR VVVTHSLGND HVATWLREHS TQQREFVAYP 
VDVADFESCQ QCAARILSEV GPVDVLINNA GITRDSTLRK MTHEAWRAVM STDLDSVFNM
TKPFCEGMVE RRWGRIVNIS SINGSKGAFG QTNYAAAKAG IHGFSKSLAL ELASKGVTVN
TVSPGYLDTK MVRAVPQDVL DQHVIPQIPV GRLGQPKEVA ALISYLCSDD GAYVTGANLA
INGGQHMD