Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5123 |
Symbol | phaB3 |
ID | 4041984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1818056 |
End bp | 1818802 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637980541 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_587251 |
Protein GI | 94314042 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.753936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCG GACGCATTGC GGTAGTGACG GGGGGCATGG GTGGTCTGGG CGAAGCCATC GCCGAAAGGC TGCTGAGCGA CGGATTCCGC GTGGTCGTCA CGCATTCGCT TGGCAACGAT CATGTCGCGA CCTGGCTGCG CGAGCACAGT ACGCAGCAAC GCGAGTTCGT GGCCTACCCG GTAGATGTCG CCGACTTCGA ATCCTGCCAG CAATGTGCGG CCAGGATATT GTCCGAGGTG GGCCCGGTGG ATGTCCTGAT CAACAATGCC GGCATCACGC GCGATTCGAC CTTGCGCAAG ATGACGCACG AGGCCTGGCG CGCCGTGATG TCTACCGACC TCGATTCGGT GTTCAACATG ACCAAGCCGT TCTGCGAAGG CATGGTGGAG CGTCGCTGGG GCCGGATCGT GAACATCTCA TCGATCAACG GCTCGAAGGG CGCGTTTGGC CAGACTAACT ATGCAGCGGC AAAGGCCGGC ATCCACGGAT TCAGCAAATC GCTGGCGCTG GAGCTGGCCA GCAAGGGCGT GACGGTCAAC ACCGTTTCTC CCGGTTATCT CGATACGAAG ATGGTGCGGG CAGTGCCGCA GGACGTGCTC GACCAGCACG TGATTCCGCA GATTCCGGTC GGCCGCCTGG GTCAGCCGAA GGAAGTGGCC GCGCTGATCA GTTACCTCTG CTCGGACGAT GGCGCGTACG TGACCGGCGC CAACCTTGCC ATCAATGGTG GCCAACATAT GGATTGA
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Protein sequence | MSSGRIAVVT GGMGGLGEAI AERLLSDGFR VVVTHSLGND HVATWLREHS TQQREFVAYP VDVADFESCQ QCAARILSEV GPVDVLINNA GITRDSTLRK MTHEAWRAVM STDLDSVFNM TKPFCEGMVE RRWGRIVNIS SINGSKGAFG QTNYAAAKAG IHGFSKSLAL ELASKGVTVN TVSPGYLDTK MVRAVPQDVL DQHVIPQIPV GRLGQPKEVA ALISYLCSDD GAYVTGANLA INGGQHMD
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