| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5113 |
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| Symbol | |
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| ID | 4041974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1806189 |
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| End bp | 1807181 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980531 |
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| Product | extra-cytoplasmic solute receptor |
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| Protein accession | YP_587241 |
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| Protein GI | 94314032 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000122246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATG GCTTTCGGCG CCGTCGCCTC ATGGCGGCCA TTGGCTTTTC ATTCGCACTA
GGCGGTACTT CCCTGGCTCC GGCACATGCC GATACGTGGC CGACCAAGCC GGTCACGATC
GTGGTGGCGT TCGCGCCCGG CGGCATGACC GATATCGTTG GCCGGATGCT CGCGGCCGAG
CTGAGCCAGA CGTTCAAGCA GAGCTTCGTG GTGGAGAACC GCCCCGGCGC GGCCGGACAA
CTCGCCACGG AATACGTTGC CCGCAAGCCG AATGACGGCT ACACGCTGCT GCTTAGCGCC
ACCGGGCACG TGATTGGGCC GGCCGTGCAG AAGACCGTGC GGTATCGCCC GGTCCTGGAT
TTCGAGCCGA TTGCTCTGAT CGCCAAGGCG CCGAACATGC TCGTGGTGAA CCCCTCTGTG
CCGGCGCATA CCGTGCCCGA GTTCGTGACG TGGGCCAAGG CCCAGGGCAG CGTGCCCTAT
GGTTCCGCAG GCGTGGGAGG CTCCACCCAC CTCGCGGGCG AGCTGTTCCG CCATATGACC
GGCGCGCCGC TGGTACACGT GCCATACAAG GGCGCGTCGC CCTCCACCAG CGATGCCGTG
GCCGGCCAGA TTCCGGTGGT GTTCCAGGAT TCGATGAGCG TCTCCGCGTT CATCGCCGCC
GGCAAGCTGC GTCCGATCGC CGTGACCAGC CTGGAACGCA GCAAGCTGTT CCCCGATGTG
CCGACGATTG CCGAGGCCGG GTACAAGAAC TTCGACGCCT ATACCTGGCT GGGGCTGTAC
GCACCGACCG GGACGCCGGC CGCCATCGTC ACGCGCCTGA ATACCGAGGT GAACCGGATC
ATGTCGTCGC CCGACATGGT GGCGAAACTC AAGAAGCAGA ACGCCGAGGC GGCGGGCAAT
CTGAATCCGG CCGAATTCCG CAAGTACGTC GAGACCGAAG TGGCCAAGTG GCAGAACATG
GTCAAGATCA CCGGCGTGCA GATCGAGCAG TAA
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| Protein sequence | MQHGFRRRRL MAAIGFSFAL GGTSLAPAHA DTWPTKPVTI VVAFAPGGMT DIVGRMLAAE
LSQTFKQSFV VENRPGAAGQ LATEYVARKP NDGYTLLLSA TGHVIGPAVQ KTVRYRPVLD
FEPIALIAKA PNMLVVNPSV PAHTVPEFVT WAKAQGSVPY GSAGVGGSTH LAGELFRHMT
GAPLVHVPYK GASPSTSDAV AGQIPVVFQD SMSVSAFIAA GKLRPIAVTS LERSKLFPDV
PTIAEAGYKN FDAYTWLGLY APTGTPAAIV TRLNTEVNRI MSSPDMVAKL KKQNAEAAGN
LNPAEFRKYV ETEVAKWQNM VKITGVQIEQ
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