| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5112 |
|---|
| Symbol | |
|---|
| ID | 4041973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1805782 |
|---|
| End bp | 1806180 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980530 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587240 |
|---|
| Protein GI | 94314031 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00000923569 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTG CACCTCCATC CGGCGACCCG GCAACCACGT CTGCCGACGC CCACTACTTC
CAGCGCCTCT CCGAAGGCGT GTTCGAAATC CCCCAGTGCC GCGACTGCGG CCGGCATCAC
TTCTTTCCGC GCGTCGTTTG CCCTCATTGC GGCTCCGTAG CGTTGCAGTG GGCCGCGCCG
AGCGGTCTTG GCACCGTGTA CTCGACCACG GTCGTGCGCA AAAAGGACGG GGATTACAAC
GTGTGCCTGG TCGATCTCGA CGAGGGGCCG CGCATGATGA GCTGCGTGAT CGGTGTGGAT
CCCGACGCGG TGAGGATCGG GCACCGCGTC AGGGCGCAGG TGCAGCGCAA GGGCGAGGAC
GCATTGCTGG TGTTCGCGCC GGCCGGGGAG CGACAATGA
|
|---|
| Protein sequence | MTIAPPSGDP ATTSADAHYF QRLSEGVFEI PQCRDCGRHH FFPRVVCPHC GSVALQWAAP
SGLGTVYSTT VVRKKDGDYN VCLVDLDEGP RMMSCVIGVD PDAVRIGHRV RAQVQRKGED
ALLVFAPAGE RQ
|
|---|
| |