Gene Rmet_5110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5110 
SymbolfadB1 
ID4041971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1802421 
End bp1804568 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content67% 
IMG OID637980528 
Productshort chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase 
Protein accessionYP_587238 
Protein GI94314029 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0890426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGG CAATCGAATC CATTCCTCTT TCTTCCACCG TGAGCTGGCA ACAGCAGGGC 
GATATCGCCG TGCTGTGGCT CGACAACCCG CCGGTGAACG GCCTGGGCGA TAGCACCCGC
GCCGGCCTGC ACGCCGGGAT CACGCGCGCG CTGCAGGATG CCACCGTGGC CGGGGTTGTG
CTGGCAGGCG CCGGCAAGGC GTTTTGCGGC GGCGCGGACA TCCGGCAGTT CAATACGCCT
GCCGCGACCG CCCGGCCGCT TACGCGCGAT GTGCTGGCGC TGATCGAATC GGCGAGCAAG
CCCGTGGTGG CTGCGATACA CGGCGTGGCG CTCGGTGGTG GCCTGGAGCT GGCCATGGGA
TGCCACTATC GCGTGGTGGC ATCCGACGCC AGCCTGGGTC TGCCAGAGGT CAACCTCGGG
CTCGTGCCCG GTGGCGGCGG TACCCAGCGG CTGCCACGGC TCGTTGGTGT GGAACAGGCG
CTGGACATGG TTCAGCAAGG GGCGTCCGTC AGCGGCGAAG CCGCCGCGCG CATCGGTCTT
GCCGATGCGG TAGCAGACGC GAGGCCGAGC GGCACACGGG ATGCTGGACC TGTTGTCGCA
CTGGCGATCG ACTTTTGCCG GAGTGCTGCC GCCCGTGCGG TGGCGCATCC GGTTGCCAGT
GCGTTGGCCG TCAAGGCGAG CGGCGATGTC GATTTCGGGG CGCGGATTGC CGCGATCAAC
GGCAAGGCAC GCAATGCGCT CGCGCAGAAT GCGTGCATCC GGTGCGTCGA AGCCGCGACG
CAGCTGCCGA TTGCCGACGG GCTGGCATTC GAGCGCGCCC AGTTCGAGGC GCTTGTTGCG
GGCAACGAGT CGAAGGCGCT GCGCCATATT TTCTTCGCCG AGCGCGAGGC GCCGAAGTTT
GCCGAAGGGA AGGGACTGGC GCTGCGGCCG ATCGAACGTG TCGCCGTCAT CGGTTCCGGG
ACGATGGGCG TCGGCATCGC AATGTCGTTC GTCAACGCAG GCATTCCGGT CATGCTGATC
GAACGCGAGC AGGCCGCGCT GGACCGCGGC ATGGCACTGA TCCGCCGCAA CTACGAGATC
ACCGCCGCGA AAGGCAAGCT GGCGCCGCAG CAGATTGACG CGTGCATGGG GCGCATAACG
CCGACGCTGG CGTTCGAGGC CGTGGCCGAT GCCGATCTGG TGGTCGAAGC CGTGTTCGAG
GACATGGCCG TGAAGCAGGC CATCTTCGAG CGTCTGGACG CGCTGTGCAA GCCGTCGGCC
ATCCTGGCGA CGAATACGTC GCGGTTGAAC ATCGACACGA TCGCGGCGTC GACCAAACGC
CCGGGCGACG TGATCGGCCT GCATTTTTTC AGCCCGGCGA ACGTGATGAA GCTGCTGGAA
GTCGTGCGTG GACAGGCGAC CCGCGCCGAC GTCATCGCGT CGTGCATGGC GATGGCGCAG
CGCATCCGAA AGATTCCGGT GCTGGTGCGG GTGTGCGAAG GGTTTGTCGG CAACCGGATG
CTGACGCCTT ACTGGCGGGA GGCCGGCTTC CTGTTGGAAG AGGGCGCATC GCCACTGCAG
GTCGATCGCG CATTGACGCA GTTCGGCATG GCGATGGGCC CGCTGACGAT GGCGGATTTG
GCCGGCATGG ACATCAACTG GGCCACGCGG AAGCGGCTGG CGCCGACGCG GCCGGCGCAC
CTGCGGTATT CGGCGGTGGC CGATCGAATC TGCGAACTGG GCCGGTTCGG GCAGAAGACC
AACGGTGGCT ACTACCGCTA CGAACCCGGC AGTCGCACGC CGATCCCCGA CCCGCAGATC
GACGCGTTGA TCGAAGAGTG CGCGCGCGAG GCAGGCATTA CGCGGCGACC GGTTGCCGAC
GAGGAGATCG TCGAGCGCTG CATGCTGGCG CTGATCAATG AAGGCGCGCG CATCCTGGAC
GAGGGCATCG CGCAGCGCGC TTCCGATATC GACGTGGTGT ACGTGCATGG CTACGGCTTT
CCGGCGTGGC GTGGCGGCCC CATGTTCTAT GCGGAAACGC TCGGTCTGGC GCACGTGCTG
GCCCGTATCC GCGCGTTGCA GGACGTGCAC GGTGCCCATT GGGAGCCTGC GCCACTGCTC
GAGCGGTTGG TCGCAGAAGG CCGGCAGACT TTCGACGGTC CACGTTGA
 
Protein sequence
MSQAIESIPL SSTVSWQQQG DIAVLWLDNP PVNGLGDSTR AGLHAGITRA LQDATVAGVV 
LAGAGKAFCG GADIRQFNTP AATARPLTRD VLALIESASK PVVAAIHGVA LGGGLELAMG
CHYRVVASDA SLGLPEVNLG LVPGGGGTQR LPRLVGVEQA LDMVQQGASV SGEAAARIGL
ADAVADARPS GTRDAGPVVA LAIDFCRSAA ARAVAHPVAS ALAVKASGDV DFGARIAAIN
GKARNALAQN ACIRCVEAAT QLPIADGLAF ERAQFEALVA GNESKALRHI FFAEREAPKF
AEGKGLALRP IERVAVIGSG TMGVGIAMSF VNAGIPVMLI EREQAALDRG MALIRRNYEI
TAAKGKLAPQ QIDACMGRIT PTLAFEAVAD ADLVVEAVFE DMAVKQAIFE RLDALCKPSA
ILATNTSRLN IDTIAASTKR PGDVIGLHFF SPANVMKLLE VVRGQATRAD VIASCMAMAQ
RIRKIPVLVR VCEGFVGNRM LTPYWREAGF LLEEGASPLQ VDRALTQFGM AMGPLTMADL
AGMDINWATR KRLAPTRPAH LRYSAVADRI CELGRFGQKT NGGYYRYEPG SRTPIPDPQI
DALIEECARE AGITRRPVAD EEIVERCMLA LINEGARILD EGIAQRASDI DVVYVHGYGF
PAWRGGPMFY AETLGLAHVL ARIRALQDVH GAHWEPAPLL ERLVAEGRQT FDGPR