Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5110 |
Symbol | fadB1 |
ID | 4041971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1802421 |
End bp | 1804568 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980528 |
Product | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_587238 |
Protein GI | 94314029 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0890426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGG CAATCGAATC CATTCCTCTT TCTTCCACCG TGAGCTGGCA ACAGCAGGGC GATATCGCCG TGCTGTGGCT CGACAACCCG CCGGTGAACG GCCTGGGCGA TAGCACCCGC GCCGGCCTGC ACGCCGGGAT CACGCGCGCG CTGCAGGATG CCACCGTGGC CGGGGTTGTG CTGGCAGGCG CCGGCAAGGC GTTTTGCGGC GGCGCGGACA TCCGGCAGTT CAATACGCCT GCCGCGACCG CCCGGCCGCT TACGCGCGAT GTGCTGGCGC TGATCGAATC GGCGAGCAAG CCCGTGGTGG CTGCGATACA CGGCGTGGCG CTCGGTGGTG GCCTGGAGCT GGCCATGGGA TGCCACTATC GCGTGGTGGC ATCCGACGCC AGCCTGGGTC TGCCAGAGGT CAACCTCGGG CTCGTGCCCG GTGGCGGCGG TACCCAGCGG CTGCCACGGC TCGTTGGTGT GGAACAGGCG CTGGACATGG TTCAGCAAGG GGCGTCCGTC AGCGGCGAAG CCGCCGCGCG CATCGGTCTT GCCGATGCGG TAGCAGACGC GAGGCCGAGC GGCACACGGG ATGCTGGACC TGTTGTCGCA CTGGCGATCG ACTTTTGCCG GAGTGCTGCC GCCCGTGCGG TGGCGCATCC GGTTGCCAGT GCGTTGGCCG TCAAGGCGAG CGGCGATGTC GATTTCGGGG CGCGGATTGC CGCGATCAAC GGCAAGGCAC GCAATGCGCT CGCGCAGAAT GCGTGCATCC GGTGCGTCGA AGCCGCGACG CAGCTGCCGA TTGCCGACGG GCTGGCATTC GAGCGCGCCC AGTTCGAGGC GCTTGTTGCG GGCAACGAGT CGAAGGCGCT GCGCCATATT TTCTTCGCCG AGCGCGAGGC GCCGAAGTTT GCCGAAGGGA AGGGACTGGC GCTGCGGCCG ATCGAACGTG TCGCCGTCAT CGGTTCCGGG ACGATGGGCG TCGGCATCGC AATGTCGTTC GTCAACGCAG GCATTCCGGT CATGCTGATC GAACGCGAGC AGGCCGCGCT GGACCGCGGC ATGGCACTGA TCCGCCGCAA CTACGAGATC ACCGCCGCGA AAGGCAAGCT GGCGCCGCAG CAGATTGACG CGTGCATGGG GCGCATAACG CCGACGCTGG CGTTCGAGGC CGTGGCCGAT GCCGATCTGG TGGTCGAAGC CGTGTTCGAG GACATGGCCG TGAAGCAGGC CATCTTCGAG CGTCTGGACG CGCTGTGCAA GCCGTCGGCC ATCCTGGCGA CGAATACGTC GCGGTTGAAC ATCGACACGA TCGCGGCGTC GACCAAACGC CCGGGCGACG TGATCGGCCT GCATTTTTTC AGCCCGGCGA ACGTGATGAA GCTGCTGGAA GTCGTGCGTG GACAGGCGAC CCGCGCCGAC GTCATCGCGT CGTGCATGGC GATGGCGCAG CGCATCCGAA AGATTCCGGT GCTGGTGCGG GTGTGCGAAG GGTTTGTCGG CAACCGGATG CTGACGCCTT ACTGGCGGGA GGCCGGCTTC CTGTTGGAAG AGGGCGCATC GCCACTGCAG GTCGATCGCG CATTGACGCA GTTCGGCATG GCGATGGGCC CGCTGACGAT GGCGGATTTG GCCGGCATGG ACATCAACTG GGCCACGCGG AAGCGGCTGG CGCCGACGCG GCCGGCGCAC CTGCGGTATT CGGCGGTGGC CGATCGAATC TGCGAACTGG GCCGGTTCGG GCAGAAGACC AACGGTGGCT ACTACCGCTA CGAACCCGGC AGTCGCACGC CGATCCCCGA CCCGCAGATC GACGCGTTGA TCGAAGAGTG CGCGCGCGAG GCAGGCATTA CGCGGCGACC GGTTGCCGAC GAGGAGATCG TCGAGCGCTG CATGCTGGCG CTGATCAATG AAGGCGCGCG CATCCTGGAC GAGGGCATCG CGCAGCGCGC TTCCGATATC GACGTGGTGT ACGTGCATGG CTACGGCTTT CCGGCGTGGC GTGGCGGCCC CATGTTCTAT GCGGAAACGC TCGGTCTGGC GCACGTGCTG GCCCGTATCC GCGCGTTGCA GGACGTGCAC GGTGCCCATT GGGAGCCTGC GCCACTGCTC GAGCGGTTGG TCGCAGAAGG CCGGCAGACT TTCGACGGTC CACGTTGA
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Protein sequence | MSQAIESIPL SSTVSWQQQG DIAVLWLDNP PVNGLGDSTR AGLHAGITRA LQDATVAGVV LAGAGKAFCG GADIRQFNTP AATARPLTRD VLALIESASK PVVAAIHGVA LGGGLELAMG CHYRVVASDA SLGLPEVNLG LVPGGGGTQR LPRLVGVEQA LDMVQQGASV SGEAAARIGL ADAVADARPS GTRDAGPVVA LAIDFCRSAA ARAVAHPVAS ALAVKASGDV DFGARIAAIN GKARNALAQN ACIRCVEAAT QLPIADGLAF ERAQFEALVA GNESKALRHI FFAEREAPKF AEGKGLALRP IERVAVIGSG TMGVGIAMSF VNAGIPVMLI EREQAALDRG MALIRRNYEI TAAKGKLAPQ QIDACMGRIT PTLAFEAVAD ADLVVEAVFE DMAVKQAIFE RLDALCKPSA ILATNTSRLN IDTIAASTKR PGDVIGLHFF SPANVMKLLE VVRGQATRAD VIASCMAMAQ RIRKIPVLVR VCEGFVGNRM LTPYWREAGF LLEEGASPLQ VDRALTQFGM AMGPLTMADL AGMDINWATR KRLAPTRPAH LRYSAVADRI CELGRFGQKT NGGYYRYEPG SRTPIPDPQI DALIEECARE AGITRRPVAD EEIVERCMLA LINEGARILD EGIAQRASDI DVVYVHGYGF PAWRGGPMFY AETLGLAHVL ARIRALQDVH GAHWEPAPLL ERLVAEGRQT FDGPR
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