Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5108 |
Symbol | |
ID | 4041969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1800156 |
End bp | 1801136 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980526 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_587236 |
Protein GI | 94314027 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000351886 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.964391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATA TGAAGCCAAC CTTCCTGGCA CTGGCAGCGC TGGCCTCTGT GGGCCCGGCA TGCCTTGCCC ACGCCGCCGA CTGGCCGGAC AAGCCGATCA AGCTCGTGGT GCCCTACGCG GCCGGTGGTA CTACCGACAT CATCGCGCGC GTGGTCGGCA CGCGGATTGG CGCGGTGCTG AAGCAGCCTG TTGTGGTCGA GAACCGTCCC GGCGCCGGTG GCGCGGTAGG CAGTGCCTAC GCGGCCAAGC AGCCGGCCGA TGGTTATACG CTCGTGATGG AAGTGGAAAG CTCCCACGCG GTTAACCCGA ACGTCTATCA GAAGACGGCG TACGATCCGG TCAAGGATTT CGATCCGATC AGCAATCTGG CGGACGTGCC CAACGTGCTG GTGGTCAATC CGTCATTCCC CGCTCAGGAC ATGTCGGCCT TCATCAAGCT GCTGAAGGCG TCGCCGGGCA AGTATTCATT TGGGTCGTCG GGCAACGGTG GCCTGAGTCA TATGAATGGC GAACTGTTCA TGAGCGTCAC GGGCACGAAG ATGCTGCACG TGCCGTACAA GGGCCTGGGG CCGGCGCTGA ACGATGCGAT GGCTGGACAG ATCCAGGTTG TGTTCGACAA TATCCCGTCG TCGTCCGGCC TGATCCAGGG CGGCAAGCTG CGGCCCCTGG CCGTGGCGGC CAAGCATCGA CTCAAGATGC TGCCCAATGT GCCGACCTAC GCGGAAGCCG GGCTGCCCGC GATGAACAAT CCGTCGTGGT TTGGCCTCGG CGCGCCGGCT GGCACGCCGC CGGCGATCCT CGACAAGATT AATGCGGCCG TCAAGCAGGT GCTGGCCGAG CCGGAGGTGG TCGACGCCAT CGAGAAGCAG GGCGCGCTGC CTGCCTATAC CACGCGCAAG GCCTTCGCCG ATCTGATACG GGAGCAGAAT CAGCACTGGA AGAAGGTAGT CGAGGATATC CATTTCGCAA AGCTGCAGTA A
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Protein sequence | MMNMKPTFLA LAALASVGPA CLAHAADWPD KPIKLVVPYA AGGTTDIIAR VVGTRIGAVL KQPVVVENRP GAGGAVGSAY AAKQPADGYT LVMEVESSHA VNPNVYQKTA YDPVKDFDPI SNLADVPNVL VVNPSFPAQD MSAFIKLLKA SPGKYSFGSS GNGGLSHMNG ELFMSVTGTK MLHVPYKGLG PALNDAMAGQ IQVVFDNIPS SSGLIQGGKL RPLAVAAKHR LKMLPNVPTY AEAGLPAMNN PSWFGLGAPA GTPPAILDKI NAAVKQVLAE PEVVDAIEKQ GALPAYTTRK AFADLIREQN QHWKKVVEDI HFAKLQ
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