Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5088 |
Symbol | dppA |
ID | 4041949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1777572 |
End bp | 1779155 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980506 |
Product | putative oligopeptide/dipeptide ABC transporter |
Protein accession | YP_587216 |
Protein GI | 94314007 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0437131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.457948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACACC GACCGCTCGC CACTCTCGTC ATGGGTGCCC TGTTGCTGGC CGGCACCAGC CTGCCGGCGC AGGCGCAGGC ACCCGCCAGG ACGCTGAAGA TCGTGCCGCA CGCCGACCTG AAGATCCTCG ACCCGACCTT CACCACGGCC TACATCACGC GCAACTTCGG CTATATGGTC TATGACACGC TGTTCGCGCA GGACGCGACC GGCAAGCCGC AACCGCAGAT GGTGGAGAAG TACACCAGCA GCAAGGACGG CAAACAGTGG AGCTTCACGC TGCGTCCCGG CCTGAAGTTC TCCGATGGCA ACGCCGTGAC CGCCGCGGAC GCAGTGGCAT CGTTGCAGCG CTGGGGCGCG CGCGACAGCC TGGGACGCTC GATGGGCGAG GCCGGCGCCG AGTGGAAGGT CGTCGACGCA CGCACCTTCA CGCTGACGCT ACAGCAGCCC TTTGGGCTGG TGCTGGAAGC GCTGGCCAAG CCCTCCGGCT TTCCACCGGT GATCCTGCCC GAACGCCTGG CCAAGCAACC GGCCACCGCG CCGCTGAACG AAGTGGTGGG TTCCGGTCCC TATCTGTTCA AGCGCGACGA ATGGGTGCCG GGCAACAAGG CCGTGTTCGT GCGCAACCCC AACTACACGG GCCGCCGCGA AGCACCAAGC GGTCTGGCCG GCAACAAGAC CAGCCACTTC GATCGCATCG AATGGCTGTA CCTCCCCGAC GCCAACAGCG CGGTCGCCGC CCTCAAGCGC GGCGAGGTGG ACCTGATCGA GCAGTTGCCA CCGGACTACA TCACGCCGCT GCGTTCCGAC AACAGCCTCA AGGTCGGCTC TGGCGGCACC TACCAGGGAA TGCTGGTGAT GAACCAGTTG CACCCGCCCT TCAACAATCC GAAGGTACGC CAGGCCCTGC TGCAGGCGGT CAGCCAGGAG CGCTTCACCG CGGCCATGGG CTTCCCGCTG GACATGCGCA TGAACTACTG CGCCACGTAC TTCATTTGCG GCAGCCCCAA CGACACGGCC GCCGGCGCCG AACCCTTCCG CAAACCGGAC GTCGCCAAGG CCAAGCAGAT GCTTGCGGCC TCGGGCTACA AGGGTGAAAA GGTGGTGTTG CTGGTGCCCA CCGACATCAC CGCGCTGAAC GCCGAGGCGC TGATGGCCGC GCAGACCATG CGCAGCATCG GCATCAACGT CGACATGCAG AACATGGACT GGGCCTCGAT CGGCGCGCGA CGTGCCAAGC GTGACGCGCC GGATGCCGGT GGCTGGAACA TGTATGTGAC CGTGGCAGGC GAGTTCGACG TCAACACCCC GGTTACCAAT GCCTACCTCA GCGCCGCCTG CGGCAACAGC CTGCCGGGCT GGCCGTGCGA CAAGCCGCTG GATGAATTGC GCAGCGCGTG GGTGCGCGAG ATGGTGCCGG CCAAGCGGCG CGATCTGCTC GATGCCTTCC AGAAGCGCGC CTATGAAGCG GTGCCGTACG TGAACACCGG GCAGTACTCG TCCGCGTTCG CCGCGCGGGC CAACCTGAAG GGCCTGGACA AGCTGTGGGG CGGCGTACCC ACGGTCTGGG CGCTTGACCG CTGA
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Protein sequence | MQHRPLATLV MGALLLAGTS LPAQAQAPAR TLKIVPHADL KILDPTFTTA YITRNFGYMV YDTLFAQDAT GKPQPQMVEK YTSSKDGKQW SFTLRPGLKF SDGNAVTAAD AVASLQRWGA RDSLGRSMGE AGAEWKVVDA RTFTLTLQQP FGLVLEALAK PSGFPPVILP ERLAKQPATA PLNEVVGSGP YLFKRDEWVP GNKAVFVRNP NYTGRREAPS GLAGNKTSHF DRIEWLYLPD ANSAVAALKR GEVDLIEQLP PDYITPLRSD NSLKVGSGGT YQGMLVMNQL HPPFNNPKVR QALLQAVSQE RFTAAMGFPL DMRMNYCATY FICGSPNDTA AGAEPFRKPD VAKAKQMLAA SGYKGEKVVL LVPTDITALN AEALMAAQTM RSIGINVDMQ NMDWASIGAR RAKRDAPDAG GWNMYVTVAG EFDVNTPVTN AYLSAACGNS LPGWPCDKPL DELRSAWVRE MVPAKRRDLL DAFQKRAYEA VPYVNTGQYS SAFAARANLK GLDKLWGGVP TVWALDR
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