| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5086 |
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| Symbol | |
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| ID | 4041947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1774806 |
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| End bp | 1775963 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637980504 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_587214 |
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| Protein GI | 94314005 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00135818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.404785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAA CCACGGCCCC ACTCCGCTCT GACTTTCTGG TAATCGGCGC AGGTATCGCT
GGCGCCTCCG TCGCGTACTG GCTCGCGCCG CACGGCAGCG TCACCGTGCT GGAGCGGGAA
AGCCAGCCGG GCTATCACTC CACCGGCCGA TCCGCCGCGC TGTTCATGGA AAGCTACGGC
ACGCCTCAGG TGCGCGCGCT GACGATGGCC AGCCACGCCT TTCTCGCAAA TCCGCCGCAG
GGCTTTGCCA CGCATCCGCT GCTGACGCCG CGCGGCGCGC TGATGGTTGC CGCGCCCGGG
CAGCAGGCCC TGCTCGACGA ACACTGGGAA ATCCTGCGCG CGATGGCGCC AGAGGCCGAA
CTGCTGACCG CGCAGCAGGC TTGCGAACGT GTGCCCGTGC TGCGTCCGGA GATGGTGATC
GGCGCGGTCT ACGAGCCCGG CGCGGCCGAC ATGGATGTCC ATGCGATCCA TCAAGGCTAC
CTGCGTGGCA TACGTCAGGC CGGTGGCAAG CTGGTCTGCG ACGCGGAGGT CCGCGCCATC
GCGCGTCATG GCGATGTCTG GCGCGTGGAA GCGGGACAAG CCGTCTACGA AGCGCCGGTC
GTGCTGAATG CCGCCGGTGC GTGGGCCGAC GTGATCGCGC GCCAGGCCGG CGTCTCCCCG
CTTGGCTTGC AGCCCTGCCG GCGTTCGGCC TTTGTTTTCC AGCCGCCCGC CGGCGTCGAC
AGCCATGGCT GGCCCATGGT GCACAGTGCC GACGAGTCCT GGTACATCAA GCCCGACGCT
GGCATGTTGC TCGGCTCTCC GGCCAATGCC GACCCGGTCG AGCCGCAAGA CGTGCAGCCC
GAGGAACTGG ATATCGCGAT GGCGATCCAC CGCATCGAGG AAGCCACCAC GCTGACGATC
CGCCATCCCG CCCGTACCTG GGCCGGCCTG CGCTCCTTCG TGGCGGACGG CGACCTGGTC
GGTGGCTTCG ACGATCGCGC GCCCGGCTTC TTCTGGGTGG CTGCGCAGGG TGGCTATGGC
ATCCAGACGT CCGCGGCCAT GGGCGAGACC TGCGCCGCGC TGGCGCGTGG CCTGCCTGTG
CCCGCGCACG CCGCGTCCTT CGGGCTGACC GCCGAAATGC TGGGGCCCGC GCGGTTGCGC
CGCGCTGCGG CCTCATAG
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| Protein sequence | MTATTAPLRS DFLVIGAGIA GASVAYWLAP HGSVTVLERE SQPGYHSTGR SAALFMESYG
TPQVRALTMA SHAFLANPPQ GFATHPLLTP RGALMVAAPG QQALLDEHWE ILRAMAPEAE
LLTAQQACER VPVLRPEMVI GAVYEPGAAD MDVHAIHQGY LRGIRQAGGK LVCDAEVRAI
ARHGDVWRVE AGQAVYEAPV VLNAAGAWAD VIARQAGVSP LGLQPCRRSA FVFQPPAGVD
SHGWPMVHSA DESWYIKPDA GMLLGSPANA DPVEPQDVQP EELDIAMAIH RIEEATTLTI
RHPARTWAGL RSFVADGDLV GGFDDRAPGF FWVAAQGGYG IQTSAAMGET CAALARGLPV
PAHAASFGLT AEMLGPARLR RAAAS
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