Gene Rmet_5082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5082 
Symbol 
ID4041943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1771870 
End bp1772523 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID637980500 
Producthypothetical protein 
Protein accessionYP_587210 
Protein GI94314001 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.343747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.389351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG ATTTCGACGC CGGCGCGGAG CCCACCGTCC CGGCCTGGGC GGTGTTCGGT 
GACCTGATGT CGGTCATGCT GGGCGCCTTC GTGCTGGTGC TGCTGGGTGT GATCGGCGTG
CAGATGGAAC TGTCGGCACG GCTCGAGAAC GAGGTTAAGC AGCGGCAGGA GGAACTGAAA
CGCCGCCAGA CACTGGAGGA AGCGCTCGCC GGGCCGCTGG CGGCTGGCCG GGTCACGCTC
AAGGACGGAC GCATCGGCAT CAGCGGCAAT GTGCTGTTCG CGCTAAATTC CGACCAGTTG
CAGCCGGAAG GCCGCGCGTT GCTCAAGAGC CTTGCCGCGC CGCTGTCGGC CTATCTGGGC
GCGCGCGACG AGATCCTGAT GGTGAGCGGT TTCACCGACG ACCAGCAGGT CAGGGAAGGC
AACCGGCGAT TTGCCGACAA CCTGGAACTG TCGGCTCAGC GAGCGCTGAC CGTAACCCGC
GCGCTGATCG AAGCGGGCCT GCCCCCGGCT TCGATCTTCT CGGCGGCATT CGGCTCGCAG
CAGCCGGTCG CGTCGAATGC CACGGAGGAA AGCCGTGCAA AGAACCGACG CGTGGAAATC
GCGCCAGTGC CGAGGGTATC TGCCGGGGCC GGGGCCACGA AACCCCATGC ATAA
 
Protein sequence
MTDDFDAGAE PTVPAWAVFG DLMSVMLGAF VLVLLGVIGV QMELSARLEN EVKQRQEELK 
RRQTLEEALA GPLAAGRVTL KDGRIGISGN VLFALNSDQL QPEGRALLKS LAAPLSAYLG
ARDEILMVSG FTDDQQVREG NRRFADNLEL SAQRALTVTR ALIEAGLPPA SIFSAAFGSQ
QPVASNATEE SRAKNRRVEI APVPRVSAGA GATKPHA