Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5082 |
Symbol | |
ID | 4041943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1771870 |
End bp | 1772523 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980500 |
Product | hypothetical protein |
Protein accession | YP_587210 |
Protein GI | 94314001 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.343747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.389351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGACG ATTTCGACGC CGGCGCGGAG CCCACCGTCC CGGCCTGGGC GGTGTTCGGT GACCTGATGT CGGTCATGCT GGGCGCCTTC GTGCTGGTGC TGCTGGGTGT GATCGGCGTG CAGATGGAAC TGTCGGCACG GCTCGAGAAC GAGGTTAAGC AGCGGCAGGA GGAACTGAAA CGCCGCCAGA CACTGGAGGA AGCGCTCGCC GGGCCGCTGG CGGCTGGCCG GGTCACGCTC AAGGACGGAC GCATCGGCAT CAGCGGCAAT GTGCTGTTCG CGCTAAATTC CGACCAGTTG CAGCCGGAAG GCCGCGCGTT GCTCAAGAGC CTTGCCGCGC CGCTGTCGGC CTATCTGGGC GCGCGCGACG AGATCCTGAT GGTGAGCGGT TTCACCGACG ACCAGCAGGT CAGGGAAGGC AACCGGCGAT TTGCCGACAA CCTGGAACTG TCGGCTCAGC GAGCGCTGAC CGTAACCCGC GCGCTGATCG AAGCGGGCCT GCCCCCGGCT TCGATCTTCT CGGCGGCATT CGGCTCGCAG CAGCCGGTCG CGTCGAATGC CACGGAGGAA AGCCGTGCAA AGAACCGACG CGTGGAAATC GCGCCAGTGC CGAGGGTATC TGCCGGGGCC GGGGCCACGA AACCCCATGC ATAA
|
Protein sequence | MTDDFDAGAE PTVPAWAVFG DLMSVMLGAF VLVLLGVIGV QMELSARLEN EVKQRQEELK RRQTLEEALA GPLAAGRVTL KDGRIGISGN VLFALNSDQL QPEGRALLKS LAAPLSAYLG ARDEILMVSG FTDDQQVREG NRRFADNLEL SAQRALTVTR ALIEAGLPPA SIFSAAFGSQ QPVASNATEE SRAKNRRVEI APVPRVSAGA GATKPHA
|
| |