| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5062 |
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| Symbol | |
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| ID | 4041924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1751948 |
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| End bp | 1752838 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980483 |
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| Product | hydroxyquinol 1,2-dioxygenase |
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| Protein accession | YP_587193 |
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| Protein GI | 94313984 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000399441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCAA CGCCCCACGC AGCCGCCGAA GCCGCGCTGA CCGAGCAGGT CGTCGCGCGC
TTCGCCGACA CGCCCGACCC TCGCCTGCGC GCGCTGATGC AAGGGCTGGT GCGCCACCTG
CACGCCTATG TGCGCGAGTG CGAGCCGACG GAAGCGGAGT GGTTCGCCGC CATCCAGTTC
CTGACCGATA CCGGCAAGAT GTGCGACGGG CTGGTCCGCC AGGAATTCAT CCTGCTGTCG
GACACGCTGG GTGTGTCGAT GCTGGTCGAT GCGATCAACC ACCGGCAGTC CACGGGCGCT
ACCGAAACCA CCGTATTCGG CCCGTTCTAC ATCGCCGGGA TGCCCGACCG TTCGGCAGGC
GAGAACATGG CCCTCACGCC AGGCACGCCG GCGCTGGTTC ATGGTCGCGT GTTTTCCGCC
GATGGCACGC CGCTGCGTGG CGCGGTGCTC GACATCTGGC AGACCGCGGA GAACGGCATG
TACTCGGGCC AGGACACTGC GCAGCCTACG GGCAACCTGC GTGGCCGTTA TCGCACCGAC
GACGAGGGTG ACTACGCCAT CCGCACCATC GTGCCGGTGA GCTATCCGAT TCCGACCGAC
GGGCCGGTCG GCCAGATGCT CACGTCTACC AGACGGCATC CGTGGCGGCC GGCACACCTG
CATTTCATGA TCGATGCGTC GGGCCATCGC CGGCTGGTCA CGCATCTGTT CAACCAGGGC
GATCCGTATC TGGACTCGGA CGCGGTGTTC GGCGTCAAGC CATCGCTGCA GGTGGCCTAC
GAGGAGCGGC CCGCCGACCA TCCGCTGGCG CGGCGCTTCG GCTTTGATGG GCCGTTTCGT
GAAGCACGCT ACGACTTCGT GCTCGATCCG GTCCCCAAGG CAGGGGACTG A
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| Protein sequence | MEATPHAAAE AALTEQVVAR FADTPDPRLR ALMQGLVRHL HAYVRECEPT EAEWFAAIQF
LTDTGKMCDG LVRQEFILLS DTLGVSMLVD AINHRQSTGA TETTVFGPFY IAGMPDRSAG
ENMALTPGTP ALVHGRVFSA DGTPLRGAVL DIWQTAENGM YSGQDTAQPT GNLRGRYRTD
DEGDYAIRTI VPVSYPIPTD GPVGQMLTST RRHPWRPAHL HFMIDASGHR RLVTHLFNQG
DPYLDSDAVF GVKPSLQVAY EERPADHPLA RRFGFDGPFR EARYDFVLDP VPKAGD
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