| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5059 |
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| Symbol | atoD |
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| ID | 4041921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1749495 |
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| End bp | 1750175 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980480 |
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| Product | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha |
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| Protein accession | YP_587190 |
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| Protein GI | 94313981 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00434544 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGACA AGATCGCGCC CTCGCTCGCC GCCGCGGTGG CGGGCATTGG CGACGGCGCC
ACGGTGCTGG TCAGCGGCTT CGGCGGCTCG GGCATTCCCG ACGAACTGCT CGATGCCTTG
CTGGCCCACG GCGCGCGCGA CCTCACCATC GTCAACAACA ACGCCGGCAA CGGCGATGCC
GGCATTGCCG CGCTGATCCG CGCGGGCCGC GTGCGCAAGG TCATCTGCTC GCACCCGCGT
TCGAACAATG CCGAGGCGTT CATTGATGCG TATCGCGCCG GCAAGGTCGC GCTCGAGTGC
GTGCCGCAGG GCACGCTGGT GGAGCGGATG CGCGCCGCGG GCGCCGGGCT CGGGCCGTTC
TTCACACCCA CGGCGTATGG CACCGCGCTG GCCGAAGGCA AGGAAAGCCG CGTTATCGAT
GGCACCGGCT ACGTGCTGGA ACAACCGCTG CACGGCGACT TCGCGCTGAT CAAGGCGCAC
CGTGCCGATC GCTGGGGCAA TCTGACCTAC CGCTATGCAG GTCGCAATTT CGGGCCGGTG
ATGTGCACTG CCGCGCGGCA CACCATCGTG CAGGTCGACG AGATCGTCCC GCTGGGCGAG
ATGACGCCGC AACACGTGAT GACGCCGGGA ATCTTCGTCC AGACAGTGGT CCTGGCAACA
TCGGGAGACA GCCATGCATG A
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| Protein sequence | MIDKIAPSLA AAVAGIGDGA TVLVSGFGGS GIPDELLDAL LAHGARDLTI VNNNAGNGDA
GIAALIRAGR VRKVICSHPR SNNAEAFIDA YRAGKVALEC VPQGTLVERM RAAGAGLGPF
FTPTAYGTAL AEGKESRVID GTGYVLEQPL HGDFALIKAH RADRWGNLTY RYAGRNFGPV
MCTAARHTIV QVDEIVPLGE MTPQHVMTPG IFVQTVVLAT SGDSHA
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