| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5050 |
|---|
| Symbol | |
|---|
| ID | 4041912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1738518 |
|---|
| End bp | 1740620 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980471 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587181 |
|---|
| Protein GI | 94313972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.567325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CGCCCATTGC GCTTTGCATC GCGGTGCTTG CCTTGTCGGC ATGCGGTGGT
GGTGGTGGCG ATTCTTCAAC GGGGGGGACC ACGACCACGA CCACGCCACC GGGCACCACC
GCGCCCACCA AGCAGGTCGT CAGCGGCGTT GCGGCGACCG GCGCGGCGAT GCAAGGCGCC
ACGGTGACGC TGACGGACGC CGCGGGCAAG TCGGCAAGCT GCCCGGCCGA CGCCACCACT
GGCTCGTTCC AGTGCGATGT GACCGGCCTG ACCGCACCGT TCGTGCTGGC CGCCATGGGC
AACGTAGCCG ACTCGCAGGC CACGCTGATC AGCCTGAGCG CCACGGCTGG CACCCAGACG
ATCAACATCA CGCCGCTCAC CAACGCGATT GCGGCGACGA TCATCGGCGA CAACCCGACC
AAGTTGCTGG CCGATACCAG TCTCCTGCAG TCCAAGGTCA CGGCATCGTC GATCAGCACC
ACGGTGAAGG CGTACTCGGA TGCGCTGGCC GCTCTGCTGG CCGCCACCGG CAACACCGGC
GTGGATCTGA TCTCCGGTCC GCTGACGGCC GGTGCGCCCG GGCTGGACCG TCTGCTCGAT
CAGGTGAAGG TCAACGTGCT CCCCAATGGC GGCGTGCAAC TGACATCGGT GGCGGGCGCC
TCGAGCGATA CGCCGACGAT GCTCCAGCTT GCGCCCGGTG TTGCTCCGAC GGCGGCTGAC
ACGGCAAGCC TGCCAAGCGT GGCCACGATT GGCGGCGCAC CGGTTTCGAG CCTGCCCAGC
GCCAGCGATC TTGCCGGGCT GCAGGCGGGG TTTAACCAGT GCTTCGCGGC GTCGACGACA
GCTTCTGCCC GGTTGAGCGG AAGCGTGGCC GCCTGTGCGC AGATCATCGT CGACGATGTC
ACGCCGGGCG CGCTGATGGC GGGTGTGCCC AGCAGCTACC TTAGCAACGG CGCGAATGCC
GAGCAGGACC TGGGCTCCAG TATCGTTGGG GACGACGGCA TGACTGGCGC TGTCTTCAGC
TTGCCGGAGA TCATCCGGGT CCAGGCGGCC GACAAGGTCT GGATCAAGGT GTCCTGGACA
CGTGCCGACG GCATCCGCGA TGGCATGCAG CAGATCGCGC AGATCGCGTT GCAGCCGTCG
GCTCGGACGA CCAGCGACAA TGGCTGGCGT CTGGTCGGCA ACCAGCGTCA CGTGCTGAGC
AAGGTCACCG GCAATGCGCA GCGCTGGGAC TGGTTGAACA CCGTCAAGGC GACCACCGGC
ACCAATGCCT TCGTCAGTTC GCTGAGTTTG CAGGTAGGTA TCACGGACGA CCAGAATGTA
CCCGTCGATT TTGCCGTGGT GACAGGCCCG GGGCTGCGTG AAGGGGTGCT GCTCAAGCCG
AGCACCGGTG CGTGCGATAC GCTCAATATC CACGCGCAGC TTGCGCCGGG TGACATGCAA
GGTGTGGACG CCAGCGCGAT TCCGGGCAAG TATTCGAGCA AGCTGAACAG CTGCCGCAAC
AGCTACCGTC TGGCCGGCGT TGCCCAGGAT CCGGCCGCCC AGGCGCAGTT CAAATGGCCG
GGCAGCAACG CCGCGTTTTC GAATCCGCAG TTGAGCGCCA CGGAACTCGC GAACGTGGTG
CCGTTCGGTG TCTACACCTT CGCGATCTAC CAGAAAGGCA ATGCGGCGGC GCCGGCCTAC
ACCTACGCGG TGCGTTTGCG CACACCGCCG CCGTCGCCGG ATACGCTGCG CCAGTATGCG
TGGCAGGACG TCAGCAAGAC CGCGCGTGAT GCCCTGACGC CCGGCTCGGG ATCGGAGTTC
GCTGGCGGGG CAACATTCCC GATGAGCTGG ACCTCTGCAT CGGGTGTGCC GTTCGTGAAA
AAGACCAACG TGCAGATTCG ATCAACCATC GGTGGCGCCC CGCAGGTATT CGTAAGCGGC
AATGCGCGTG CCAAGCCGGC GGCCGCGAAT ACGGTGGTCA ACGTGTTGGT GCCGGGCGAT
CAGGGGGCCG CGTTTCCGGC GGTTGCCGGG GCGACTGGCA CGAGCGATAT GTCGTTCGCG
AACCTTAGCT GGTCTGACAC GTTCGATCTG AGTTTCAGTA CCAGCGTGGA GTACGACCAC
TAA
|
|---|
| Protein sequence | MKLTPIALCI AVLALSACGG GGGDSSTGGT TTTTTPPGTT APTKQVVSGV AATGAAMQGA
TVTLTDAAGK SASCPADATT GSFQCDVTGL TAPFVLAAMG NVADSQATLI SLSATAGTQT
INITPLTNAI AATIIGDNPT KLLADTSLLQ SKVTASSIST TVKAYSDALA ALLAATGNTG
VDLISGPLTA GAPGLDRLLD QVKVNVLPNG GVQLTSVAGA SSDTPTMLQL APGVAPTAAD
TASLPSVATI GGAPVSSLPS ASDLAGLQAG FNQCFAASTT ASARLSGSVA ACAQIIVDDV
TPGALMAGVP SSYLSNGANA EQDLGSSIVG DDGMTGAVFS LPEIIRVQAA DKVWIKVSWT
RADGIRDGMQ QIAQIALQPS ARTTSDNGWR LVGNQRHVLS KVTGNAQRWD WLNTVKATTG
TNAFVSSLSL QVGITDDQNV PVDFAVVTGP GLREGVLLKP STGACDTLNI HAQLAPGDMQ
GVDASAIPGK YSSKLNSCRN SYRLAGVAQD PAAQAQFKWP GSNAAFSNPQ LSATELANVV
PFGVYTFAIY QKGNAAAPAY TYAVRLRTPP PSPDTLRQYA WQDVSKTARD ALTPGSGSEF
AGGATFPMSW TSASGVPFVK KTNVQIRSTI GGAPQVFVSG NARAKPAAAN TVVNVLVPGD
QGAAFPAVAG ATGTSDMSFA NLSWSDTFDL SFSTSVEYDH
|
|---|
| |