Gene Rmet_5048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5048 
SymbolhutU 
ID4041910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1735591 
End bp1737270 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content66% 
IMG OID637980469 
Producturocanate hydratase 
Protein accessionYP_587179 
Protein GI94313970 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.154593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CCAATCGTTA CCGTGACGTA GAGATCCGCG CGCGGCGCGG CAATCAGCTT 
CAGGCCAGGA GCTGGCTGAC CGAGGCGCCG CTGCGCATGC TGATGAACAA CCTCGACCCG
GAAGTGGCGG AGAACCCCAA GGAACTGGTG GTCTATGGCG GCATCGGCCG CGCCGCGCGC
AACTGGGAGT GCTACGACAA GATCGTCGAG ACGCTCGTGA CACTGGGCGA CGACGAAACA
CTGCTGGTGC AGTCGGGCAA GCCGGTGGGC GTGTTCAAGA CGCATGCCGA TGCGCCGCGC
GTGCTGATCG CCAACTCCAA CCTGGTGCCA CACTGGGCTA GCTGGGAGCA CTTCAACGAG
CTGGATGCCA AGGGTCTGGC GATGTACGGT CAGATGACGG CAGGTTCCTG GATCTATATC
GGCAGCCAGG GCATCGTGCA GGGCACCTAC GAGACCTTCG TCGAGGCCGG CCGCCAGCAC
TATGACGGCA ACCTGACCGG ACGCTGGGTG CTGACCGCGG GCCTGGGCGG CATGGGCGGT
GCCCAGCCGC TGGCCGCGAC GCTGGCCGGC GCATGCTCGC TGAACATCGA ATGCCAGCAA
AGCCGTATCG ACTTCCGTCT GCGTACGCGC TACGTCGACG AGCAGGCCAC GGATCTGGAT
GACGCGCTGG CCCGTATCGC GAAGTACACC GCAGAAGGCA AGGCCATCTC CATCGCGCTG
TGCGGCAATG CCGCCGAGAT CCTGCCGGAA CTCGTGCGTC GCGGCGTGCG CCCGGACATG
GTGACCGACC AGACCAGCGC CCACGACCCG CTCAATGGTT ACCTGCCGAT CGGCTGGACC
TGGGACAAGT ACCGCGACCT CGCGCAGACG AAGCCGGCCG AGGTGGTGAA GGCCGCCAAG
CAGTCGATGG CCAAGCACGT CGAGGCGATG CTGGCCTTCC AGAAGATGGG CGTGCCCACC
TTCGACTACG GCAACAACAT CCGCCAGATG GCCAAGGAAG AGGGCGTGTC GAACGCCTTC
GATTTCCCGG GCTTCGTGCC GGCCTATATC CGTCCGCTGT TTTGCCGTGG CATTGGTCCG
TTCCGCTGGG CCGCGTTGTC CGGTGATCCG CAGGACATCT ACAAGACCGA TGCCAAGGTC
AAGGAACTGA TCCCCGACGA CGCGCACCTG CACCGCTGGC TGGACATGGC GAAGGAGCGC
ATCAGCTTCC AGGGCCTGCC GGCGCGGATC TGCTGGGTTG GCCTGGGCCT GCGTGCCAAG
CTGGGCCTGG CCTTCAACGA AATGGTGCGT TCGGGTGAAC TGTCCGCGCC GGTGGTGATT
GGTCGTGATC ATCTGGACTC GGGCTCGGTG TCGAGCCCGA ACCGCGAGAC CGAATCCATG
AAGGACGGCT CGGACGCCGT GTCTGACTGG CCACTGCTCA ACGCGCTGCT GAATACCGCC
AGTGGCGCCA CCTGGGTGTC GCTGCACCAC GGCGGCGGCG TCGGCATGGG CTTCTCCCAG
CACTCTGGCG TGGTGATTGT CTGCGACGGC ACCGATGCCG CCGCCGCCCG TATCGCCCGC
GTGCTGAACA ACGATCCGGC GACCGGCGTG ATGCGCCACG CCGATGCCGG CTACGAGATC
GCCATCGATT GCGCCCGCGA AAACGGCCTG AACCTGCCGA TGCTCGGCAC CTCCAAGTAA
 
Protein sequence
MSTPNRYRDV EIRARRGNQL QARSWLTEAP LRMLMNNLDP EVAENPKELV VYGGIGRAAR 
NWECYDKIVE TLVTLGDDET LLVQSGKPVG VFKTHADAPR VLIANSNLVP HWASWEHFNE
LDAKGLAMYG QMTAGSWIYI GSQGIVQGTY ETFVEAGRQH YDGNLTGRWV LTAGLGGMGG
AQPLAATLAG ACSLNIECQQ SRIDFRLRTR YVDEQATDLD DALARIAKYT AEGKAISIAL
CGNAAEILPE LVRRGVRPDM VTDQTSAHDP LNGYLPIGWT WDKYRDLAQT KPAEVVKAAK
QSMAKHVEAM LAFQKMGVPT FDYGNNIRQM AKEEGVSNAF DFPGFVPAYI RPLFCRGIGP
FRWAALSGDP QDIYKTDAKV KELIPDDAHL HRWLDMAKER ISFQGLPARI CWVGLGLRAK
LGLAFNEMVR SGELSAPVVI GRDHLDSGSV SSPNRETESM KDGSDAVSDW PLLNALLNTA
SGATWVSLHH GGGVGMGFSQ HSGVVIVCDG TDAAAARIAR VLNNDPATGV MRHADAGYEI
AIDCARENGL NLPMLGTSK