| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5044 |
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| Symbol | |
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| ID | 4041906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1730337 |
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| End bp | 1731410 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980465 |
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| Product | mechanosensitive ion channel protein |
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| Protein accession | YP_587175 |
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| Protein GI | 94313966 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.861996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCC CTCTTCTTTT CGATCACCCC TGGTTTGGCA CGTGGACGGC GGCCCTGGTT
GCGGTCGTTG TCGTGCTGCT GGCACATCGC ATCGGCAGCC TGCTGCTACT GCGGATCACG
CGTTCCGCCC AGATACTCCA TCCCATGGTC GTCAAGGCGC GGGTCCCGTC GAAGGCGGTT
CTGCTGCTGC TCGCGTTGCA GACTGTCTGG CAGGCCGCTC CGGACGAACT GCGCTGGATC
GACAATGTGC GGCATGTCAA TGGCCTGCTG TTGATCGCAG CCATGACATG GCTCGTGGCG
CGGGTCATTG CCGGCTTCGC GCAGGGCGTG CTGGACCGGC ACCCTGTGGA TGTCGAGGAC
AACATGAATG CCCGCCGCAT CCATACCCAG ACACGCGTGC TCTCGCGCAT CGCGATGGCG
TTGGTGGTGG TGATCGGGGC GGCGATGTTG CTGATGACGT TTCCCGGCGC GAGGCAGGTC
GGCGCCAGCC TGCTGGCCTC GGCAGGTGTG GTCGGGCTGG TCGCCGGCCT GGCTGGCAAG
ACGGTGTTCA GCAATATGAT CGCGGGGTTG CAGCTTGCAT TGACGCAGCC GATCCGGCTC
GACGATGTGC TGATCGTCGA AGGCGAGTGG GGCCGAGTCG AGGAAATCAC GGCGACGTAC
GTGGTGCTGC GGATTTGGGA CGAGCGGCGC CTGATCATCC CGCTGCAGTA CTTCATCGAA
AAGCCATTTC AGAACTGGAC CCGCAACAAC TCCCAGCTAC TGGGCTCGGT GTTCTTCCAT
GTCGACTACG GGATGCCGCT GGCGCCGCTG CGCAAGGAGC TGGAGCGCAT CGTGAACAAT
GCGCCCCAGT GGGATCGGCG GTTTTTCAAC CTGGTGGTGA CCGACGCAAC GGAACGCACG
ATGCAGATTC GCGTGCTGTG CACCGCTGCA TCCTCGGGCC TGGCGTGGGA TCTTCGCTGC
GTCGTGCGTG AGGGGCTGAT CGACTTCATG CAGCGCGAAT ATCCGCAGTT CCTGCCGCGG
ATGCGCATTG ATGGCGAGGC GGGGCGAACG GGAGGCAATG GCGCGCAGGA CTAG
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| Protein sequence | MNLPLLFDHP WFGTWTAALV AVVVVLLAHR IGSLLLLRIT RSAQILHPMV VKARVPSKAV
LLLLALQTVW QAAPDELRWI DNVRHVNGLL LIAAMTWLVA RVIAGFAQGV LDRHPVDVED
NMNARRIHTQ TRVLSRIAMA LVVVIGAAML LMTFPGARQV GASLLASAGV VGLVAGLAGK
TVFSNMIAGL QLALTQPIRL DDVLIVEGEW GRVEEITATY VVLRIWDERR LIIPLQYFIE
KPFQNWTRNN SQLLGSVFFH VDYGMPLAPL RKELERIVNN APQWDRRFFN LVVTDATERT
MQIRVLCTAA SSGLAWDLRC VVREGLIDFM QREYPQFLPR MRIDGEAGRT GGNGAQD
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