| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5041 |
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| Symbol | |
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| ID | 4041903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1727941 |
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| End bp | 1729143 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980462 |
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| Product | putative signaling protein |
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| Protein accession | YP_587172 |
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| Protein GI | 94313963 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.883935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG CAGACGTCGA AATGAGTTTC GTTGTTGATC CGGTTCGGGT CGAGTTCTCG
GATCCGGGGC TCGAGCGGGA GTTTCAGCAA CACCATCTGC GGACCACGCG GGCGTCGTTG
CGGGTCACCC TGGTGTTCTG TTCGCTGTTT TATCTGGCCT TTTCCCTGAC CGATCTGGCC
GCGCTGGGCT ATGGGACGTC GTTCCTCGTG CTGCTGCTGG GGCGAATCAC CGTTGCGCTG
ACTGCCTGCG GCGGTCTGTA TCTGATTCGC CGGAAAACTG AGTCGGTGCT GGCCCACCGG
GCCGTGGCCA GCGCGGCGGA GGTCGTCGGG ATGGCGATCT TCATGCTGGT CGTCTGGTTC
CGTCCCGGCG AGTTGCCCTG GCACGCGATG TCGCTCTGCA TCATGCTGAT CGTCATCTAC
GTCTTCATCC CAAATCGGCT CATCACCGCG ATTGGCATCG CCCTTGGCGC GACGGCGGCC
TTCATCGCGC TGGCCGTGAT AAGGGGGGAG TCGAGGTTCT CCGACGAAGT CACGATGGCG
ATGCTTCTGC TGCTGACCAA CAGCTTCGGC ATCATCGCGG CGCGCCGCTA TCACCGGCTG
TGGCGCGACG AGTATCGGGC GCTCAGTACA TTGAAGGCGC TATCCATCCG CGACCATCTC
ACAGCCTGCT TCAACCGGCG GCATCTGCAC ACGACGCTGC TGCCGCAGGT GCTGGAGCGG
GCTCGCGCCG AGCGTCGCTG GCTGACGCTG ATGGTTTGCG ATATCGACCA TTTCAAGCGC
GTCAACGACA ACCACGGCCA CCAGGGTGGC GATGCCGTGC TGATGCACGT TGCCATGCTG
CTGCAGGACC GCATCCACGA GCCACGGGAC AGCGTCGTTC GCTACGGCGG GGAGGAGTTC
CTGCTCGTCA TGCCGCAGAT GGACTTCGAG TCGGCCGCCA GTCTGGCCGA GGACATGCGC
GCCGCGGTGG CGGGCAGTGA GGTGCCCGGC CCCGATGGCA AGAGCATGCG CGCCACGGTC
AGCATCGGGG TGCTCTCCGT CGATTTCTCG GCCAGCGATA CCGAGGTCAC CGAAAGCGCG
TTGATTGCCG CTGCCGATAT GTTGCTCTAT GAAGCCAAAC GGGCCGGACG GAACAGCATC
CGGACCCGGC TTTGGGCGGA TATGGTGTCC AGCCACGCTG TCTTGAGTAT GCGAACGGCC
TGA
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| Protein sequence | MSEADVEMSF VVDPVRVEFS DPGLEREFQQ HHLRTTRASL RVTLVFCSLF YLAFSLTDLA
ALGYGTSFLV LLLGRITVAL TACGGLYLIR RKTESVLAHR AVASAAEVVG MAIFMLVVWF
RPGELPWHAM SLCIMLIVIY VFIPNRLITA IGIALGATAA FIALAVIRGE SRFSDEVTMA
MLLLLTNSFG IIAARRYHRL WRDEYRALST LKALSIRDHL TACFNRRHLH TTLLPQVLER
ARAERRWLTL MVCDIDHFKR VNDNHGHQGG DAVLMHVAML LQDRIHEPRD SVVRYGGEEF
LLVMPQMDFE SAASLAEDMR AAVAGSEVPG PDGKSMRATV SIGVLSVDFS ASDTEVTESA
LIAAADMLLY EAKRAGRNSI RTRLWADMVS SHAVLSMRTA
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