Gene Rmet_5026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5026 
Symbol 
ID4041888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1712391 
End bp1712831 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content65% 
IMG OID637980447 
Producthypothetical protein 
Protein accessionYP_587157 
Protein GI94313948 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000215714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.277815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA AGAAGCATAT CGGCAAGGTC ATCGCGGATT TCCGCACGTC GGCGCCCGCG 
AGCCAGTTGC GCTTCTTCGC CAAGGCCACC GGCGAGACGC GTGCGATCTA CACCGACGAG
GCAGCCGCAC GCGACGCCGG CCATCGCGGC CTGCCGTTGC CGCCGACGTT CCTGTTCTCG
CTGGAACTGG TGAACCCGCC GAGCGGCTGG CGCGAGGAAC TGGGCATTCG CACCGAGCGC
ATCCTGCACG GCGAGCAATC GTTCACGTAT CACCGCATGG CCTACGCCGG CGATGTGCTG
CACTTCCGCA CCACCATCAC CGACATCTAC GACAAGCGGA ATGGCGCCCT GGACTTCGTG
GTGCGCGAGA CCCGTGTCAC CAACCAGGAC AACGAGCACG TGGCGGACCT GCGCAGCGTG
CTGGTACAGC GCAATGGATA A
 
Protein sequence
MIDKKHIGKV IADFRTSAPA SQLRFFAKAT GETRAIYTDE AAARDAGHRG LPLPPTFLFS 
LELVNPPSGW REELGIRTER ILHGEQSFTY HRMAYAGDVL HFRTTITDIY DKRNGALDFV
VRETRVTNQD NEHVADLRSV LVQRNG