| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5021 |
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| Symbol | |
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| ID | 4041883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1702232 |
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| End bp | 1704799 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637980442 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_587152 |
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| Protein GI | 94313943 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00982675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.260255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGCA GTGTGCCTTC CCACAAGCTC ATGCCGCCCA GGCTGGGCGG CGGCATCGCC
ATGCGCGACG CGCTGCTGGC GCGGCTGCAT GAGGCGCGCC ATGCGGCGCT GGTGGTGCTG
GCTGCCAGCC CGGGGTACGG CAAGACCACG CTGTTGGCGC AGTGGCGCCA GCAACTCGTG
GGGGCGCGCG CGCGCGTGGG CTGGCTCTCG CTCGGCCCGG AACTTGACGC GCCGACGCGG
TTTTGCGCAG CCATCGCGGC CAGCGTGGCC AGCGTAGTAC AGGGCGACGT GTCGCCATCA
TCCCGGCACG ACCCGACCGA AGCCCTGATC GCGGCGCTGG CCGCGGTGCC CGATGAACTC
TATCTGATGC TCGATGGCGC GGAGTACTTG CGCGACACCG GCGCATGGGC CGTGTTGCAG
GCCTTGATCG ACGCGCGCCT GCCGCGCCTG CATCTGGCGC TGGCCACGCG CTGCCGTCCG
GCCTTGCGTC TTGGGCAGCT TGGGGCGGAG GGCGTGGTGG TCGAATTCGA CGACGAATCG
CTGGCCTTCA CCCTGGCCGA AACCCGAGCG TGCCTGCCGC CCGAATCGGG TCAGGCCGCG
AGCGTGCGGT TGATGGAGGC TACCCGCGGC TGGCCGGCGG GCGTGCGAAT GCTGGCTGGG
GGGCGCGCGC CCGACGATTC GCGCGCGGCG CTCGACGCGT ACTGGTCCGA AGTGGTGGCG
CCAGGGCTGA GCGTGGGACA GGCGCGGTTG TTGCGCTGGC TCGCATGGCT CGACCGCTGG
ACGCCGGAAC TCGCCGCCGA GGTCACGGGT GTGCCTCGCG CCGCCGAATG CGCGCGGAGT
CTGGTCGGGC AGGGGATCTT CATCGGCCCA GCCCGGGCGC ACGCGGGCTG GCATACGCTC
CATCCGCTGT TTGCCGACTG GCTGCGGCGG TCGATGCCGC TTGCCGGTGC AGACCGGCTG
GCGCTGCACC GGCGAGCCGT CGCCGCGTGG CTGCGGGTCG GTAGCAGCGG TGAGGCGCTG
GACCACGCCA TGCGTGCCGA CGATGGCGGG CTCGTGGCGC ACGTCGTGCG CGAAGCCATG
CCGGCGATGC CGGCGCTGAG TCAGCTTCGC GCGTTACCGG ACTGGATCGA TCAGGCTGGC
GTCAAACATG TGGTCGACGA GCCCGCCCTG TGGCTGGCCG CGGCCTGGGC TTGCACCGTT
GCGGCACGTC TGGGCGAGGC GGAGCGCTGG TTGGCCATGG TCGCCGGGTG CGACGATGTT
GCCCCGCAAG TCGCGCTGGT CCGCGCGAGT ATCGCGTTCC AGAAAGATGA CCCTGCCACC
ATGGATGTCT GGCTGGCCCG GCTCGGCGGC CATGCACTGC CGCATCCGTC GCTGGAGCAC
ATTCGCGCCG CGCTGGCGGT GCGATGCGGG GCCATGCTGC ATCGGCCCGA GTTTCCGCCG
GTGCCAAGGC TGGAAGCGGC GCCTCATGAT GAACTGGTGG CGATGGCGCA TGGCGCGGCC
GCGTTGACCA TGCTGCTGCG CGGGGATGCG CGCAGGGCTC AGGCTATCGG GATGCCGGCG
GCACGCATGG CGCAGCAGAT TCATGGCAGA CGTTCGGTGA GCGCTTGCGT ATGCGCGGTG
CCGGTAGCGG CCGCCCTGCT CGAACAGGAC CGCGCCGAGG AAGCTGCCGA GATGATGGCC
TGCTGGCTCG ACCTGGCCCA TCACTCCTCG CCGGACGTGA TGATCGTGGC CACGCTGTGC
CAGGCACGGC TGCAATGGCT GGCCGGCGAC CAGCATGGCG CTCGCGCGAC GCTGGCCGAG
GCGCAGGCCC ACGCGGCGGG GCGGGGGCTG ATGCGGGTGC AGTTACGTCT GCTGGCGCAG
CGGGTGGTGT TCGCCATTCA AGCCGGGGAC TTGCGGCATG CTGGCCTGCT GCAGGACGAA
CTCGACGCGC TGGCCGCCAC GTTGGATGCA TCGGACATGC GCGCCCGGGA GGTCGGCACG
ATCGCGGCGT TGTCGCGCGT GCGCGTGGCG CTGAGTGCCG GCAACCCGGT TGGGGCGCTG
GCCGCGCTGG AGCCGGTCCG CTCCGACAAC GCCGGCGCGC TGGTCCTGAT CGATCTACTG
TTCGCGCGTG TGAATGCCGC CCTGGACCGG CCACAACTCG TGGTGCGCCA TCTTGAATCG
GCACTGGCCG CGGGGCTGCG GCTTGGCCTG TTGCGCATGT TGCGCGATGA GCCGGGCATT
CCGGCGCTGC TCGACTGTGT GCAGCCATCG GGCGACGCGG TGCGCGACAA CTGGCTGGGC
CGGGTGCGCG CCGCGAAGGA TCAGCTCCAG CAGCCCGCCA CGTGCCTGCC GATGATTCGG
CGGCGCAGGC GTGACGGCGA GCCGGAGCAT CTGACCCCGC GCGAGCGCGA TATCGTCGCG
CTGCTCGAGC AGTCGATGTC GAACAAGCGC ATCGCGCTGG TATTGAACCT GAGTGTCGAT
ACGGTCAAGT GGAACCTGCG CCAGATCTAC GCCAAGCTGG GCGTTTCCAC GCGCTACGAA
GTCATACTGG CCGTGCGCAA CCGGGCGCTG CGCACGGGTA CCGCCTGA
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| Protein sequence | MDCSVPSHKL MPPRLGGGIA MRDALLARLH EARHAALVVL AASPGYGKTT LLAQWRQQLV
GARARVGWLS LGPELDAPTR FCAAIAASVA SVVQGDVSPS SRHDPTEALI AALAAVPDEL
YLMLDGAEYL RDTGAWAVLQ ALIDARLPRL HLALATRCRP ALRLGQLGAE GVVVEFDDES
LAFTLAETRA CLPPESGQAA SVRLMEATRG WPAGVRMLAG GRAPDDSRAA LDAYWSEVVA
PGLSVGQARL LRWLAWLDRW TPELAAEVTG VPRAAECARS LVGQGIFIGP ARAHAGWHTL
HPLFADWLRR SMPLAGADRL ALHRRAVAAW LRVGSSGEAL DHAMRADDGG LVAHVVREAM
PAMPALSQLR ALPDWIDQAG VKHVVDEPAL WLAAAWACTV AARLGEAERW LAMVAGCDDV
APQVALVRAS IAFQKDDPAT MDVWLARLGG HALPHPSLEH IRAALAVRCG AMLHRPEFPP
VPRLEAAPHD ELVAMAHGAA ALTMLLRGDA RRAQAIGMPA ARMAQQIHGR RSVSACVCAV
PVAAALLEQD RAEEAAEMMA CWLDLAHHSS PDVMIVATLC QARLQWLAGD QHGARATLAE
AQAHAAGRGL MRVQLRLLAQ RVVFAIQAGD LRHAGLLQDE LDALAATLDA SDMRAREVGT
IAALSRVRVA LSAGNPVGAL AALEPVRSDN AGALVLIDLL FARVNAALDR PQLVVRHLES
ALAAGLRLGL LRMLRDEPGI PALLDCVQPS GDAVRDNWLG RVRAAKDQLQ QPATCLPMIR
RRRRDGEPEH LTPRERDIVA LLEQSMSNKR IALVLNLSVD TVKWNLRQIY AKLGVSTRYE
VILAVRNRAL RTGTA
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