Gene Rmet_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5012 
Symbol 
ID4041874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1691190 
End bp1691657 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID637980433 
Producthypothetical protein 
Protein accessionYP_587143 
Protein GI94313934 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0120588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.173507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTC TTGCCGTTTT TTCCGCCGTA CCGGTCGCTT TTGCTTGCGG CTATCTTGTC 
GCCCACATCG ACCTGCCGCA TGCCCACGCC CAAACCCCGC CGGCCGCGCT GGCGCCCCTG
ATCGTCAACC TGGCGGCCAT GAGCGACGAA GCCATCGGAC CGCAAGTGCC CAACATGGGC
ACGCTGCGCA CCAAGGGGCT GGTCAACACG CCTTCCGGAA CCATCGCCGT GCAGTCGGGC
AATGTCCCCA AGCACTACCA CAACAGCGCC GACGAGATTC AATACATCAT CTCGGGCAAA
GGCGTCTTCT GGCTGGGCGA CGAAAAGCGC GAGGTCGGCC CCGGTGACCT GATCGTGATT
CCCAAGGGCA CCGCGCATGC GGGCTCGATC GCGTCCAGCG GCGAGTTCAA GGCATTGGCC
ATCAAGCTGC CGCCTCAGGC CGCCGGCGAT ACCCATCTGC TGCCCTGA
 
Protein sequence
MRRLAVFSAV PVAFACGYLV AHIDLPHAHA QTPPAALAPL IVNLAAMSDE AIGPQVPNMG 
TLRTKGLVNT PSGTIAVQSG NVPKHYHNSA DEIQYIISGK GVFWLGDEKR EVGPGDLIVI
PKGTAHAGSI ASSGEFKALA IKLPPQAAGD THLLP