Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5002 |
Symbol | |
ID | 4041864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1682628 |
End bp | 1683953 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980423 |
Product | MFS family membrane efflux protein |
Protein accession | YP_587133 |
Protein GI | 94313924 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.151073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCGTA CATTCCGTTC GCTGCGCAAC TTCAACTACC GGGTGTGGGC GAGTGGCGCG ATCGTGTCCA ACATCGGCAC GTGGATGCAG CGCACGGCGC AGGACTGGCT CGTGCTCACC GAACTCACGC ATCACAATGC GACTGCCGTC GGGATCGTGA TGTCGCTGCA GTTCGGCCCC CAGATGCTGT TGTTGCCGCT TACCGGCTAT GCGGCCGACC ACTTCAACCG CCGCAAACTG CTGTTCATCA CGCAGACGGC CATGGGTTTG CTGGCGCTTG GGCTGGGCCT GATGACCGTC ACTGGCCTGG TACGTCTGTG GCATGTCTAC GTGTTCGCAT TGCTGCTCGG GTGCGTCACC GCGTTCGACG CCCCCGCGCG GCAGACCTTT GTCTCCGATC TGGTCGGCGA GGAGGACCTG CCCAATGCCG TTGCGCTGAA CTCCACCTCG TTCAATGGCG CGCGGATGAT TGGCCCTGCG ATCACGGGCC TGCTCATTGC GTCGATCGGC ACGGGATGGG TATTCCTGAT CAACGCGCTG TCGTTCGTCC CGGTGATCGG CGCGCTGCGC ATGTTGCGTC AGCACGAGCT GCACCTGAAG CCGCCCGCGC AGCGCTCGCG CGGCAGCTTT CTGGAAGGAT TCAGGTACGT GTGGAAGCGC CCCGACCTGA AGGCGGCGCT GTTCATGCTG TTCCTGATCG GCACCTTCGG CCTGAACTTC CCGATCTTCA TTTCGACGAT GTCGGTCAGT GCGTTTCATG CCGGCGCGGG ACAGTACGGC TTGCTGAGTT CGACCATGGC GATAGGGTCT GTTACCGGCA CGCTGCTGGC CGCGCGCCGG GCACGGCCGC GCATGGCGAT CCTGGTCGGT GCTGCAACCA TCTTTGGCGT GGGCTGCATG TTTGGCGCAT TGATGCCGAA TGCGGTGCTG TTCGGCCTGA CGCTGGCGGT GATCGGTGCA TCGACACAGA CGTTTACCAC GTCCACCAAC AGCCTCGTGC AGATCTCGAC CGAGCCGGCG ATGCGTGGCC GGGTAATCGC TATCCTGCTG GCCATTGCAC TGGGCACCAC GCCGCTTGGC GCGCCAGTGG TGGGGTGGGT GGCGGACCGC TTTGGTCCGC GCTGGGCGCT GGGCGTTGGG GCGGCTTCGG GATTTGCCGC GGCGCTCGTC GGTCTGTTCT ATCTGATGAG AAATCGCAAC CTGCGCTTCT ATATCGAGAC GGGTCGCCTG CGCTACAGCA TCGACAAGCC GCGCCAGACG GCGTTCATGG CGGCTCCCGC CGCGTCAGTG CCAAATGTGG TGATGAGCAA GGCGGAAGAC GAGTGA
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Protein sequence | MARTFRSLRN FNYRVWASGA IVSNIGTWMQ RTAQDWLVLT ELTHHNATAV GIVMSLQFGP QMLLLPLTGY AADHFNRRKL LFITQTAMGL LALGLGLMTV TGLVRLWHVY VFALLLGCVT AFDAPARQTF VSDLVGEEDL PNAVALNSTS FNGARMIGPA ITGLLIASIG TGWVFLINAL SFVPVIGALR MLRQHELHLK PPAQRSRGSF LEGFRYVWKR PDLKAALFML FLIGTFGLNF PIFISTMSVS AFHAGAGQYG LLSSTMAIGS VTGTLLAARR ARPRMAILVG AATIFGVGCM FGALMPNAVL FGLTLAVIGA STQTFTTSTN SLVQISTEPA MRGRVIAILL AIALGTTPLG APVVGWVADR FGPRWALGVG AASGFAAALV GLFYLMRNRN LRFYIETGRL RYSIDKPRQT AFMAAPAASV PNVVMSKAED E
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