| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5000 |
|---|
| Symbol | |
|---|
| ID | 4041862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1680552 |
|---|
| End bp | 1682090 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637980421 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587131 |
|---|
| Protein GI | 94313922 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.163634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC TGGACAAGGT TGACACCACA CGCAGGCTGC TTACGGTCCT CGGCGGAATC
GCCCCGGTGG CACTGACTTC GCTCGCAACC GTACCGGCGT CCGCATCGGC CGCAGAGTCG
AAAGGCGGTG CCCAGTCGAG CGCCGGCGCG GCGGGGACGT CCGCAGCAAA GGAGGTTCAT
CCTCCGGCGG GCCTTGCGAT GCACGCCGGC TACGCGCAGG TGATTGCCCG TATGGCTTAT
GTGTGGGGTT GGCCGATGGT CAATATGCTC AACCGCTTTG CGCGCATTAC TCAGGCACCG
CATCCCGGCC TGCTGAACGG TGTGTTGCCC GCTGCGCCGC GCGGCCAGGT GGGTATGCTT
CACGACTACA TCGATCCGGC TCAAACATTC GTGACTTGTC CGAACCAGGA CGTGGTCTAC
GGGCTGGGCT TTTTCCAGTT GGACGAAGAG CCGGTGGTGG CCCAAGTGCC CAATTTTGGA
GATCGGTTCT GGGTTTACGC ACTGTACGAC GCCCGGACGA ACCAATTCGG CCAGGTCGGC
AAGCCCTACA AGACCAAGCC CGGGTTCTAC CTGCTCGCGG GGCCGAACTG GAAGGGCACC
AAGCCTGCTG GCATCACTGC CGTGGTTCGC TGCCCGACGT CGCTGGCTAA CGCCATTCCA
CGCGTCTTCA TGAATGACAC CGCCGAGGAC CGCAAAGCTA TTCAGCCAGT CCTCAACCAG
ATTGTCTTTT ACCCGCTGAA ACAGTTCGAT GGCCGTATGA AGACCATTGA CTGGGCCAGG
GCTCCCGAGA TTCCCGGGCC AAAGTCCGAA GGTGGTGCGA GCGAAGGCGA AACCAAATGG
GTTATCCCGG AGAAGTTCTT CGACCAGTTT GCGCAGGTGT TGGACACTGT GCCGCCGCTC
CCCGGCGAGG AGGCGCTATA CGCGCAGTTC CGTTCACTGA TGGACGTTGC CAACCGTGAT
GCGGAGATCA AGAAGGCGCT GGTATCGGCT GCGGTCGAGA CCGAGCGTGA CGCGATCGGG
CCGTTTTTCG AATGGCGCCG CAACGGGCTC TCCGCAGGCA ATGGCTGGAA CCGCTCGACC
AACAACGCCC AGACCGGACT CGACTACTTC GACCGCACCG GCACGGCCAA GTCGAACATG
TTCGACAACC GCCCCCACGA AACCCAGTAT TTCTACACGG ACTTCGATGC GGCTGGGGCG
GCGCTGAACG GCGCGAGCAA CTACGAGATT GTCTTCCCCG CCGGGCAGGA GCCGCCTGTC
AACGGCTTCT GGTCGCTGAC GCTATACAAC GACAAGCACC TTTTCCACCC CAACAACCTC
AAGCGCTATT CGCTCGGCAC CAAGAACACT ACGCTGAAGC GGAACGCCGA TGGATCGCTG
ACGTTGTATG CCGGCGCGAA GTCCCCCGGC GCCGAGCGCG AATCCAATTG GCTGCCGGCT
CCGAACGGCG CCTTCTCACT CTACATTCGA GCCTATTGGG GCAAGCAGCC GATTCTTGAT
GGCTCGTGGA AGCCACCCGT GATCCGCAAG GTGGCCTGA
|
|---|
| Protein sequence | MADLDKVDTT RRLLTVLGGI APVALTSLAT VPASASAAES KGGAQSSAGA AGTSAAKEVH
PPAGLAMHAG YAQVIARMAY VWGWPMVNML NRFARITQAP HPGLLNGVLP AAPRGQVGML
HDYIDPAQTF VTCPNQDVVY GLGFFQLDEE PVVAQVPNFG DRFWVYALYD ARTNQFGQVG
KPYKTKPGFY LLAGPNWKGT KPAGITAVVR CPTSLANAIP RVFMNDTAED RKAIQPVLNQ
IVFYPLKQFD GRMKTIDWAR APEIPGPKSE GGASEGETKW VIPEKFFDQF AQVLDTVPPL
PGEEALYAQF RSLMDVANRD AEIKKALVSA AVETERDAIG PFFEWRRNGL SAGNGWNRST
NNAQTGLDYF DRTGTAKSNM FDNRPHETQY FYTDFDAAGA ALNGASNYEI VFPAGQEPPV
NGFWSLTLYN DKHLFHPNNL KRYSLGTKNT TLKRNADGSL TLYAGAKSPG AERESNWLPA
PNGAFSLYIR AYWGKQPILD GSWKPPVIRK VA
|
|---|
| |