Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4993 |
Symbol | |
ID | 4041855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1671883 |
End bp | 1673463 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980414 |
Product | MFS family membrane efflux protein |
Protein accession | YP_587124 |
Protein GI | 94313915 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.521864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGGCG ACCACCGTTC TGACCGTTGG ACGGATGGGG GCACTGGCCG GTCACGGCGC GCGGGGGCGC GTCGGACGCG ACGAAATCAG CATAGCAGAT GCATACTGCC CGCACGCGGG CAAAACCGCG TGCCGCTATA CTCCGTGGAT CCCACGCCCT CGGCCGTTGA TTCCGGCACA CCAGACACCA TGACGCCAGC CACTCCACCC ATCGCAGTCG TTGGCGGGCA GCCCGTGCCG GACGGCCATG CCGGGGCCAC CTCCCGCAAC GGCGCAAAGG TGCCGTTCGA GGCCGGTATC CGGTTGGCCG GTGTCGGCAA GTTTCAGTAT CGCCTCTTCG TCATCTTCGG CCTGGTCTGG CTCGCCGATG CCATGCAGGT GCTGTCGATC GGCTTCAGCG CGCCGTCCAT CGCGAAGACG TTTGGCATCA CGATGCCCCA GGCGCTACAG ACCGGCACGC TCTTCTTCGT CGGGATGCTG GTAGGCGCGA TTGTCTTCGG CCGCCTGGCC GACCGCATTG GCCGCCGCCC CGTGCTGATG ATCGCCATCG TCATCGACGC GCTCTCCGGC ATCGCATCGG CCTTCGCGCC AGAACTGTCC TGGCTGCTCG TGTTGCGCTT CCTGACGGGC GTCGGTGTCG GCGGCACGCT GCCGGTTGAC TACACCATGA TGGCCGAATT CCTGCCCAGC GACCGTCGCG GCCGCTGGCT GGTCCTGCTC GAATCGTTCT GGGCGATCGG CACGATCTGC TTGGCGGTAC TGGCGCTCGT GGCGCTGTCC CATGGCGATC AGGCCTGGCG CGTCATTTTC CTGGTCACAG GCATTCCCGC GCTGATTGGC GTTGTCCTGC GCTTCTACAT TCCGGAATCG CCGATGTACC TGAACCGTAG CGGGCGATCG GACGAGGCCC GCAAGGTACT GCAACGGGTG GCGAAAACAA ACGGCCGAAA CGTCGAAATC CCGGCCCTGC AATCCGACAT CGTCGCGCCG AAATCGGTCT TGACGCTGTT CTCCGGAACG TTCCGCCGCC GCAGCTTCGC GCTGTTTGCC GCGTGGGCGC TGATCTCGAT CGCGTACTAC GGTGTGTTCG TCTACCTGCC AATCAAGCTC GGCGCGGAGG GCTTCGCCTT CATGCGCGGG CAGGTCTTCC TGGTCGTCCT CGCCATCGTC CAGCTCCCCG GCTTCGCTTT GTCAGCGTAC GGCGTCGAGC GCTGGGGCCG CAAACCCACG CTGATCGGAT TCCTGCTGCT CAGCGCGGTC GGCTGCATGC TGTATAGCCT CGGCACGTCT CCCACGGTCG TCGTCGGCTC CACGTTGCTG ATGAGCTTCG CGCTGCTGGG TACCTGGGGC GCGCTGTATG CGTTCACACC AGAGGTCTAC CCGACCGACC TGAGAGCCAC TGGAATGGGC GCGGCCGGCG CGGTGGCGCG TTTCGGCGGC CTGTTCGCAC CCGCGATCAT CGCGCCAGTG ATGGCCACGC ATTTCACCCT GGCCCTCGCG TTGATCTCCA GCATGTTGCT GGCCGGCGCC TTCGCCATCG GCATGGTCAA CGTGGAATCG AAGGACCGCG CACTCGATTG A
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Protein sequence | MGGDHRSDRW TDGGTGRSRR AGARRTRRNQ HSRCILPARG QNRVPLYSVD PTPSAVDSGT PDTMTPATPP IAVVGGQPVP DGHAGATSRN GAKVPFEAGI RLAGVGKFQY RLFVIFGLVW LADAMQVLSI GFSAPSIAKT FGITMPQALQ TGTLFFVGML VGAIVFGRLA DRIGRRPVLM IAIVIDALSG IASAFAPELS WLLVLRFLTG VGVGGTLPVD YTMMAEFLPS DRRGRWLVLL ESFWAIGTIC LAVLALVALS HGDQAWRVIF LVTGIPALIG VVLRFYIPES PMYLNRSGRS DEARKVLQRV AKTNGRNVEI PALQSDIVAP KSVLTLFSGT FRRRSFALFA AWALISIAYY GVFVYLPIKL GAEGFAFMRG QVFLVVLAIV QLPGFALSAY GVERWGRKPT LIGFLLLSAV GCMLYSLGTS PTVVVGSTLL MSFALLGTWG ALYAFTPEVY PTDLRATGMG AAGAVARFGG LFAPAIIAPV MATHFTLALA LISSMLLAGA FAIGMVNVES KDRALD
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