| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4989 |
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| Symbol | |
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| ID | 4041851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1665846 |
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| End bp | 1668392 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980410 |
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| Product | putative endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_587120 |
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| Protein GI | 94313911 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.170324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.316341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGC ATTACACACT TCCAGCCGTG CTCCTCATGG CGCTACCCGC CCATGCCGAG
CTGATCATCA GTGAGTACGT CGAGGGTACC TCGAACAACA AGGCCATCGA GATCTACAAC
CCCGATGCCA CCGAGGCCGA CCTGTCGCTC TACAAGATCG AGCAGTACAA CAACGGCGTC
ACCGCGCCGA ATGCCACGTT CCAGCTCGCC GGCAAGCTCG CGCCGGGGTC GGTCTACGTC
ATGGCGCACA GCACGCTGGC CGCGGTGCTC GGCTCCAAGG TCAACCAGGC CGTAACGTTC
ACGTTCAATG GCGACGACGC CCTCACGCTC ACGCGCTCAG GTACCGTGGT GGACCATATC
GGACAGGTCG GCTTCCAGCC GCCGTCAGGT TTCTGGGGTA CAGCCACTGC CGGCACCAAG
GACCACACGC TGCGCCGCAA GGCTTCGGTG ACGCAGGGCG ACACGGACAT CACGGCGGCG
TTCGATCCAG CGGTGCAGTG GGATTCGTTC AACGTCGACG ACTTCTCGGA CCTGGGCCTG
TACAACGGCG CGGGCACCGT CACGCCGCCG CCGGTGGCGG CAGTGTGTGG CGCACCGGCA
ACGCACCTCG CTGACGTCCA GGGCGCGACA TCGACCTCGC CGCTGGCCGG TCAGAACGTC
GAGATCGAGG CCGTGGTCAC CGCCGACTAC AGCGGCACGG GCGGTTTCAG CGGATTCTTC
GTGCAGCAGC CCGACGCACA GCGCCGCAAG CTGCCCGGTG TCTCCGAAGG TCTCTTCGTC
TATGCGCCCG GCGTGACCGC GCGCGCCGGC GACCTGGTCC ACCTGGTAGG CAAGGTCGAG
GAGAAGTACG GTCAGACACA ACTGACGCTG GCTGCGAACG GTCTGGCAAG CTGCTCCAGC
GGCAACAAGG TGACGGCAGT CGATGTCACG CTGCCGCTGG CCGACGCCAA GACGCTGTCG
GCCTATGAAG GGATGCTGGT GCGCCTGCCC CAGACGCTGA CGGTCAGCGA GACCTACGAG
CTTGGCCGCT ATGGCAGCGT GCTGCTCAGC AACGGCCGCC TGCCGCTGCC GACCAACGTG
GCCCCGGCCG CGAACGGCGC CGCCGCGCAA GCCGCCGCCA ACGCGCTCAA CCGCCTGGTG
CTGGACGACG GCTCCAACCT GCAGAACCCC GCCACGGTGC CCTACCCCGC CCCGGGCCTG
TCCGCGGCCA ATCCGGTGCG TGCCGGCTAC ACGGTCAGCG GCGTGCAGGG TGTGCTCGAG
ATCCGCTACA ACGCCTGGCG CCTGCAGCCG GTACCGGGTG CCGCCGCCCC CACGTTCAGC
GCCGCCAGCA ATCCGCGCAC GGGCGCGCCC ACGCGCCATG CCCAGGCTGA CGTGCGCGTG
GCCTCGTTCA ACGTGCTGAA CTACTTCAAC GGCGACGGCA AGGGCACCGG CTTCGACGAC
CCGAACAACC GTGGCGCCAA GTCGCAAGCC GAGTTCGAGC GGCAGGAAGC CAAGATCGTT
GCCGCCATCC GCGCGATTGA CGCCGATGTG GTCGGCCTGA TGGAAATCGA GAACGACGGC
TACGGCGACC TGAGCGCTAT CCGCCGCCTG ACGAGCCAGC TCGGCGCCGA CTGGCGCTAC
GTCGATCCGG GCCTGCCCAA GCTGGGCGGC GATGCGATCA CCGTGGCGAT CATCTACAAC
AGCCGCAACG TGGAACCGGT GGGCGTGCCC GCCACGCTGG CCATCGACGA CAAGAACCGC
CAGCCGCTGG CCCGCACGTT CCACCGCGTG GGCGGCACGC AGAACTTCAC GGTCGTGGTG
AACCACCTGA AGTCCAAGGG CTGCACCGGC GCCGCCGGCA AGGACGCCGA CCAGGGCGAC
GGCCAGAGCT GCTGGAACCC CACCCGCCTG CGCGCGGCGG GCCTGATCGC CGACTGGCTG
GCTACCTCCC CGACCGGCGT GGCCGACGTG GGCAAGCTGC TGATCGGTGA CCTCAACAGC
TACGCCAAGG AAGATCCGGT ACTGCTGTTC GCCGAAAAGG GTTACGCCGA CATGGTGGCG
AAGTTCGTAG GCAAGGATGC GTACAGCTAC GTGTTCGGCG GTGAATCGGG CTACATCGAC
CACGCACTGG CCACTTCCGC ACTGGCAGAT CGCGTGCGTG CCGTGCATGA ATGGCACATC
AACGCAGACG AGCCGATCGC GCTTGAATAC TCGTTCGCGT ACAAGAGCGC CGAGCAGCAA
CAGACGTTCT ATGCAGCTGA CCCCTACCGT TCGTCGGACC ATGATCCGGT GCTGGTCGAT
CTGGCCTTGA ACTCGCAGTC GACAGGTGGC GGCAGCGATG GCGCCGGTGG CACAGGTGGC
ACAGGTGGCA CAGGTGGCAC AGGTGGCACA GGTGGCACAG ATGGCACCAG CGGTACGGGT
GGCTCCGGTG GTTCCGGTGG CTCCAGCGGA TCGGCCGATT CCGGCAACTC CGGCGCCGGC
TCGATGGACC CGTTCACGTG GCTGACGCTG GCTGCTGGCG TGGCCGCGCT GGCACGCCGC
CGCTCGTGGC GCTCGTGGGC AGTCTGA
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| Protein sequence | MRLHYTLPAV LLMALPAHAE LIISEYVEGT SNNKAIEIYN PDATEADLSL YKIEQYNNGV
TAPNATFQLA GKLAPGSVYV MAHSTLAAVL GSKVNQAVTF TFNGDDALTL TRSGTVVDHI
GQVGFQPPSG FWGTATAGTK DHTLRRKASV TQGDTDITAA FDPAVQWDSF NVDDFSDLGL
YNGAGTVTPP PVAAVCGAPA THLADVQGAT STSPLAGQNV EIEAVVTADY SGTGGFSGFF
VQQPDAQRRK LPGVSEGLFV YAPGVTARAG DLVHLVGKVE EKYGQTQLTL AANGLASCSS
GNKVTAVDVT LPLADAKTLS AYEGMLVRLP QTLTVSETYE LGRYGSVLLS NGRLPLPTNV
APAANGAAAQ AAANALNRLV LDDGSNLQNP ATVPYPAPGL SAANPVRAGY TVSGVQGVLE
IRYNAWRLQP VPGAAAPTFS AASNPRTGAP TRHAQADVRV ASFNVLNYFN GDGKGTGFDD
PNNRGAKSQA EFERQEAKIV AAIRAIDADV VGLMEIENDG YGDLSAIRRL TSQLGADWRY
VDPGLPKLGG DAITVAIIYN SRNVEPVGVP ATLAIDDKNR QPLARTFHRV GGTQNFTVVV
NHLKSKGCTG AAGKDADQGD GQSCWNPTRL RAAGLIADWL ATSPTGVADV GKLLIGDLNS
YAKEDPVLLF AEKGYADMVA KFVGKDAYSY VFGGESGYID HALATSALAD RVRAVHEWHI
NADEPIALEY SFAYKSAEQQ QTFYAADPYR SSDHDPVLVD LALNSQSTGG GSDGAGGTGG
TGGTGGTGGT GGTDGTSGTG GSGGSGGSSG SADSGNSGAG SMDPFTWLTL AAGVAALARR
RSWRSWAV
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