Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4987 |
Symbol | |
ID | 4041849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1662344 |
End bp | 1664329 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980408 |
Product | putative sensor signal transduction histidine kinase |
Protein accession | YP_587118 |
Protein GI | 94313909 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.244609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCGC GCCTCACTCC CGCCCCGCGC TCCCAGCGCT CCTCGCGATG GATCGCCCTG CTGCTCGGCT TCGTCACCCT GGCCGCGCTG ATGCTGGCCG CGTGCTCGCC CGTCGGCGAC GACAAGCGCG AAGACAAGCG CGAAGACGCC ACCAACGCCT CCACACAGAT CTTCAGGCAA GCCGATGGCA CATTCGGCGC GATCCACTGC AGCGGCGGCG CAAACGCACA CGACAACGCC GCTGGCAGCA CTGGCTCGCC ATCCGCACCG GTCTCGCTGC CGTACTACTG GGACCGCGAA TTGCCGCGCC AGAGTGGCAC CGCCACTTTC CGCATCCGCT TTCCCCATGA GGCTGGCGGC CGCGAAGGTC TGGGGTTCTA CCTCGCACGC GCGGCCAACA GCTTCGAGAT GCGCCTGAAC GGCAAGCTGC TGGCCACTGC CGGAGACCTT TGCGCGCCGG CCCTGTATGG CGGACAGCGT CCGCTCCATG TGCCCGTGCC GCAGGCCATG CTGCAGCCTG ACAACGAACT GGTGGTCACG ATCTCCGCCC GGGCGGACGC GCGTGGCGGT CTGTCGGCGA TCGAGTTCGG GCCCGATAGC GTGACGCGCG CGCACTATGA CCGCGCGCTC TGGTTCCGCG TGATCGGCCC GCTGGTCATT GCGGCTGTCA GCCTGGTGCT GGCCGGTATC TCGCTGATGA TCTGGTGGCG GCAGCGCGAT CCGCTGTTCG GACTCTATGC GCTGGCGGAG ATCGCCTGGG CCATCAGCCT GGCCGAATTC TTCCTGACCG ACGCGCCGCT GCCGCGTGGT CTCTGGCAGG TCATCATCCT CTCCGGCCGC GCCGTCTTCA TGCTGGCCAC CGCGAAGTTC GCATTCATCG TCATCGACGT GCGCGCGCGC TGGCCGCGCT GGCTGGTCAA CGGGTATCTG TGGCTCAAGC TGCCATTGAT CCTGCTGATG GCCAGCGTGC TCAGCGTGCC CTACCTGAAG CTGGCCGACT GGGCGGTCAA CGTGGTGATG GCCTGCTGCG TCGGCGGCGC GCTGGTGTGG TCGGCATGGC GTCGCCCCAA TCGCGAGCGC ATCGTGCTGG CCGGCGCGCT TGGGCTTGCC ACGGCGCTCA CGCTGGCGGA TTTCATCCGG ATCACCATGA TCGGCGACTT CTACTGGGAA ACCGCCCTGA CGAAGTACGT GTCGTTGCTG TTCAGCCTGG CGATGGCATG GCTGCTGGTG GAACGCTTCA CCGGTACCAG CCGGATGCTG GCGGACCTCA ATCGCGATCT GGATCGGAAG GTGGCGCAGA AGGAAGACGA ACTGCGACAG CTCTACGCCC GCTCGCGCGA GATCGAACGC GAACAGGCCG CGATGAAGGA ACGTGGCCGC ATCATGCGCG ACATGCACGA TGGGCTCGGC AGCACGCTGG TTGGCGCCCT CAGCCTGGTG CGTTCGGGTC AGACCTCGTC GCCGGTCATG CAGAAGCACC TGCAGCAGGC CCTCGACGCG CTGAAGCTCT CGGTCGACGC GATGCAGGAC ACCGGTGGAG ACCTGGCAGC CGTGCTCGGC ACGCTGCGCT ACCGCCTGCG TGAACGGCTC GAAGCGGCGG GCATGACAGT GGACTGGCAG GTGGACCGTC TGCCAGAATT GAAAGGACTC ACGCCCCAGA TCGTGCGGGA GTTGCAGTAC CTGCTACTCG AAGCGTTCTC GAACGCCATG CAATACGCGC CGGGCGGCGT GATCAAGGTC ATTGCGCGCA GCCTGCCCGA CGATGCCGAC GCGATCGTCA TCGAGATTCG CGACAGCGGA CCGGGGTTCG ATACCACGGC TGCGTCGCAA GGTCATGGGT TGGCCAATAT GCGCAGCCGC GCGGCCAGCA TCGGCGGCGA ACTGCAAATC GAATCGTCGC CCCACGGCAC GGCCGTGCGC CTGCTGCTGC GTCCGGATCG CTGGACGGAT ACCGCGATGT CGCGACCCGA GACAGACCCG GCCTGA
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Protein sequence | MIARLTPAPR SQRSSRWIAL LLGFVTLAAL MLAACSPVGD DKREDKREDA TNASTQIFRQ ADGTFGAIHC SGGANAHDNA AGSTGSPSAP VSLPYYWDRE LPRQSGTATF RIRFPHEAGG REGLGFYLAR AANSFEMRLN GKLLATAGDL CAPALYGGQR PLHVPVPQAM LQPDNELVVT ISARADARGG LSAIEFGPDS VTRAHYDRAL WFRVIGPLVI AAVSLVLAGI SLMIWWRQRD PLFGLYALAE IAWAISLAEF FLTDAPLPRG LWQVIILSGR AVFMLATAKF AFIVIDVRAR WPRWLVNGYL WLKLPLILLM ASVLSVPYLK LADWAVNVVM ACCVGGALVW SAWRRPNRER IVLAGALGLA TALTLADFIR ITMIGDFYWE TALTKYVSLL FSLAMAWLLV ERFTGTSRML ADLNRDLDRK VAQKEDELRQ LYARSREIER EQAAMKERGR IMRDMHDGLG STLVGALSLV RSGQTSSPVM QKHLQQALDA LKLSVDAMQD TGGDLAAVLG TLRYRLRERL EAAGMTVDWQ VDRLPELKGL TPQIVRELQY LLLEAFSNAM QYAPGGVIKV IARSLPDDAD AIVIEIRDSG PGFDTTAASQ GHGLANMRSR AASIGGELQI ESSPHGTAVR LLLRPDRWTD TAMSRPETDP A
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