| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4978 |
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| Symbol | mmfR |
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| ID | 4041840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1655281 |
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| End bp | 1655946 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980399 |
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| Product | winged helix family two component transcriptional regulator |
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| Protein accession | YP_587109 |
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| Protein GI | 94313900 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.140502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.541541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGGTAT TGCTTGTCGA AGACGATCCC ATGATCGGTG ACGCGATCCA GGGCGCATTG
AAGGATGCGT CCTACGCCGC CGACTGGGTG AAGGACGGGC AGACGGCGCT CACCACGCTG
GGCTGCCAGC ATTACGACCT GGTGCTACTC GACCTCGGTC TGCCCGGAAA GGATGGGCTG
GAGGTGCTGG CCAGCATCCG AGCCAAGGAC AACCCGGTTC CCCTGCTCAT CATCACGGCT
CGCGATGGTC TGGATGATCG CCTGCGCGGC CTGGATGGCG GGGCCGACGA CTATGTGTCC
AAGCCCTTTC AGATGGCGGA ACTGCTGGCC CGGATGCGCG CCGTCCTGAG GCGCAAAGGT
GGCACGGCAG CTCCCGTGCT CAGCAACGGC GTGGTGACGC TTGACCCGGC CACCAAAGAG
GCTTGTGCCA ATGATGGCCC CCAAGTGCAA CTGTCCAACC GCGAGTTCTC GTTACTGCAA
GCCTTGCTGG TTCGGCCTGG TGCCATCCTT TCGCGCAGCG AACTGGAGGA TCGCATCTAT
GGCTGGGGGG AAGAAGTCGA AAGCAATGCC GTCGAATATC TAATCCACGC ACTGCGGCGC
AAGCTCGGTG GCGAGGTCAT CAAGAACGTC AGGGGGGTCG GATGGATGGT CTCAAAAGGC
GCTTGA
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| Protein sequence | MRVLLVEDDP MIGDAIQGAL KDASYAADWV KDGQTALTTL GCQHYDLVLL DLGLPGKDGL
EVLASIRAKD NPVPLLIITA RDGLDDRLRG LDGGADDYVS KPFQMAELLA RMRAVLRRKG
GTAAPVLSNG VVTLDPATKE ACANDGPQVQ LSNREFSLLQ ALLVRPGAIL SRSELEDRIY
GWGEEVESNA VEYLIHALRR KLGGEVIKNV RGVGWMVSKG A
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