| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4970 |
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| Symbol | |
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| ID | 4041832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1642916 |
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| End bp | 1645387 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980391 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_587101 |
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| Protein GI | 94313892 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.883575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.269597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATG CTGCTGCCCC GGCGCCGCTT GCGCTGGGTG GGCTGCGCGT ACTCGAGGTC
GGCACGGGTC CGGCGCTTGC GTACGCGGGC AAGTTGTTCG CCGATTTCGG CGCCGAAGTC
ATCAAGGTCG AGCGCCCGGA GGGCGATGTC TGGCGGCAGA TGCCGCCGCT GGTTTCCAGT
GCCGAAGCGC CGCCGGAGAG CGCGCTCTTC GCCTGGCTGA ACACCAACAA GCGCAGCGTG
ACCGCTGATT CGGCGGATGC CGCTGACCGC GCGTGGCTTG CCCGGCTGGC AAGAACCTGC
GATGTCGTTC TCGATGCCCG CGCGCTGACC GAAGGCGTGG GCGTGCTGTC CGCACCCGTC
TGGGCCGCGG CCGCAGACGC AGACTGTAAA GGGGGACACG AGCCAATCGA GGTCGCGCTC
ACGTGGTTCG GTGAAAGCGG GCCATATAGC GAGTTCGCGG GTTCGGAAGC CGTGTGCCGT
TGCCTGGCCG GCGCTGTGCA CGGAAGCGGT CCGGTGGACG GGCCGCCGCA CATGCCGCAT
GACGTACAGA CCGCGATCGT GGGTGGGCTG ATGGCGTACT CGGCTGCGGT GGCCGCCCTG
ATCGGCGGGG CGCAAGGCAG CCGTCGCTAT GTGCTGAGCC TGCACGAAGC GGTGTTCAGC
GTGGTCGAGA TGGAAGCCGG CATGGTGCCC GACAAGCGGC ACCCGCTGCG CCGTTTGGGC
GTCAACCGCT TCTGCGGCAC GCATCCGGCC GGTATCTACG AGACCGCATC GGGCTGGATC
GGCATCTTCA CGCACACGCT GCCGCAGTGG ACGGCGCTGT GCGAAGCCAT CGGACGGCCC
GAACTGGCCC GCGACCCGCG TTTCGCGAAC GGGCAGGAGC GCATGAACCG GGCCGACGAG
ATCGACGCGA TCCTGATCCC GGCGTTCCGC ACGCGAACTG CGCAGGAATG GTTCGAGCTG
CTCGGGGACA TGAAGCATCC CACCGTACTG GTGCCAACGA TGCAGGAACT GCTCGGCCAG
GCGGTGCACC GGGAGCGTAG GGCGTTCGTG CCGGTACGAA TCGGCGGGAC GACGTTCGAA
GGTCCCGTGG TGCCACTCCG GCTCGACGCA GCCGGTCCGC TGGCCGGTGG CGACGCGCCG
CTGAAGGGCG CGGACGATGC GTTCTATCGT GCGTCGGGTC TCGATCATCG ACCGCTGCGC
CAGTTTCAAC GCGCCACCAC GGCCAAGGGG CCGCTGGAAG GAATCCGTGT CATCGACCTG
ACGATGGGCT GGGCCGGGCC GCTTGCATCG CGCACGCTGG CCGATTTCGG CGCCGAGGTC
ATCAAGGTCG AGAGCACGAG CTACCCCGAC TGGTGGCGCG GCGCGAACTT TACCGAGGAG
TTCTATCGGG AGCGGTTGTA CGAGAAGAAC TCGAATTTCA ACCTGATGAA CCGCAACAAG
CAGGGCATCA CGCTCGATCT GACGCGCGAG GAGGGCAAGC GGCTGTTGCT CGAACTGGTA
GAGGGCGCGG ACGCTGTCAT CGAGAACTAC TCGGCGGAGG TGTTGCCGAA GCTCGGGCTC
GACTACGAGG CCTTGCGCGC CCGGAACAAG CGGTTGGTCA TGGTGTCGAT GCCGGCCTTC
GGACTCGGTA ACGCGTGGAG CAACACCCGG GCCTACGGCG GCACGCTCGA GCAGGCCAGC
GGGCTGCCGC TCTACACCGG ACACCCGGAT GGGCCGCCCG CCATGACCTC CTATGCCTAT
GGCGACCCGA TTGGCGGGCT GAACGCGGGC GCGGCGATGC TGCTGGCGCT TTTCGCGCAG
CAGGCCACGG GCGCGGGGCG GCACGTCAAC CTGTCGCAGG TGGAGGCCAT GCTGCCGATG
GCCGCGCCGT TCATGATCGA GCAGTCGATC TCCGGAGCGG TATCGCCACG CCAGGGCAAT
CGTCATCCGA TGCTGTTTCC GTATGGGTGC TTCCGCTGCG ACGGGGACGA TGCGTGGGTC
GTCCTGTCTG CCACGGACGC ACACTGGCCC GCCCTTTGCC GCGTTATCGA GCGCGACGAT
CTCGCCGCTG ATGCGCAACT CGCCAGCGTG TCTGGCCGAC GCGCGCGGGG GAGTGAGATC
GACGCGGCAA TCAGCGCCTG GTGCGCGGGC CGCGATCCCG AGGCTGCGAT GCAGACGCTG
CAGCACGCCG GTATCCCGGC GGGCGTGGTG CGTCCCATGT CGCAGGTACT TCAGGATGCC
CATCTGCACG CACGCGGATT CTGGCGCGAC ATTGACCGTG CCCATAGCGG GCCGTACCGG
GCCACGACCG CCTGGTTCCG CACGGGCAGC GAGCCGCAGG CAATCCGATA TGCCGCCCCA
ACGCTTGGCG AGCACACTGA ATCGGTGCTG GCGCGCGTGC TCGCGCTCGG CCCGGCTCAG
ATCGCGGAAC TGGAGCGTAT TGGCGTGACA GGGAAAACCG CGCAGCCCAA GGTATCGAAG
GGGCGCGCAT GA
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| Protein sequence | MKDAAAPAPL ALGGLRVLEV GTGPALAYAG KLFADFGAEV IKVERPEGDV WRQMPPLVSS
AEAPPESALF AWLNTNKRSV TADSADAADR AWLARLARTC DVVLDARALT EGVGVLSAPV
WAAAADADCK GGHEPIEVAL TWFGESGPYS EFAGSEAVCR CLAGAVHGSG PVDGPPHMPH
DVQTAIVGGL MAYSAAVAAL IGGAQGSRRY VLSLHEAVFS VVEMEAGMVP DKRHPLRRLG
VNRFCGTHPA GIYETASGWI GIFTHTLPQW TALCEAIGRP ELARDPRFAN GQERMNRADE
IDAILIPAFR TRTAQEWFEL LGDMKHPTVL VPTMQELLGQ AVHRERRAFV PVRIGGTTFE
GPVVPLRLDA AGPLAGGDAP LKGADDAFYR ASGLDHRPLR QFQRATTAKG PLEGIRVIDL
TMGWAGPLAS RTLADFGAEV IKVESTSYPD WWRGANFTEE FYRERLYEKN SNFNLMNRNK
QGITLDLTRE EGKRLLLELV EGADAVIENY SAEVLPKLGL DYEALRARNK RLVMVSMPAF
GLGNAWSNTR AYGGTLEQAS GLPLYTGHPD GPPAMTSYAY GDPIGGLNAG AAMLLALFAQ
QATGAGRHVN LSQVEAMLPM AAPFMIEQSI SGAVSPRQGN RHPMLFPYGC FRCDGDDAWV
VLSATDAHWP ALCRVIERDD LAADAQLASV SGRRARGSEI DAAISAWCAG RDPEAAMQTL
QHAGIPAGVV RPMSQVLQDA HLHARGFWRD IDRAHSGPYR ATTAWFRTGS EPQAIRYAAP
TLGEHTESVL ARVLALGPAQ IAELERIGVT GKTAQPKVSK GRA
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