Gene Rmet_4968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4968 
Symbol 
ID4041830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1640543 
End bp1641571 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID637980389 
Productdi-heme cytochrome c peroxidase 
Protein accessionYP_587099 
Protein GI94313890 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.222129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.30735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA GCCGAAGCAG AGTCCTGTCG ACGTTTTCGA CGGCGACGTT CATAACGGTG 
CTGTTTGCCG CTACCGTATC CAGTGCGCAC GCCGCCGAGC CGCAAGCCGA ACCTATCCAG
CCCATCGCAC CTGCCAAGGT CCAGCACCCG GAACGCGTGG CGCTGGGCGA AAAGCTCTGG
TTCGATCCTC GTCTTTCGCG CTCTGGCTTT ATCTCGTGCA ACTCGTGCCA TAACCTCAGC
ATGGGTGGCT CGGATAACCT CAAGACGTCC ATCGGCGACA AGTGGAAGCA GGGCGGCATC
AACTCGCCGA CCGTCCTGAA TTCCAGCCTG AACTTCGTGC AGTTCTGGGA TGGCCGGGCG
AAAGATTTGC CAGAGCAGGC GCGCGGGCCG ATTGCCAATC CAATCGAGAT GGCCTTCACG
CACGAGTTGG CGGTCGACAC GCTCCGATCC ATCCCCGGAT ACGTCGACGA ATTTCGCAAG
GTCTTCAAGT CGGTCAAGCT GACGATATCC GAGATCACAC TGGCCATTGC CGCATTCGAG
GAAACGCTGG TCACGCCGAA TGCGCGATTC GACAAATGGC TGAAGGGTGA CAAGACGGCT
ATCAACGCGC AGGAGTTGCG CGGCTACCAG TTGTTCAAGG GCTCGGGCTG CGTTGCCTGC
CACAACGGCC AGAACATCGG CGGCAACTCG TTCCAGAAGA TGGGTCTCGT GGAGCCGTAC
AAGACCGGGA ATCCGTCGGA GGGCCGTGCC GCGGTGACGG GCAAGGACGC TGATCGCTTC
AATTTCAAGG TGCCGACCCT GCGCAACGTG GCGCTGACCT ACCCGTACTT CCACGATGGC
GAGGCGGCCA CGCTGAGTCA GGCGGTGGAT ACGATGGGTC GACTGCAACT GGCACGCAAG
TTCACGCCGG AAGAGAACGC CGACATCGTG GCGTTCCTGA AGACGCTGAC CGGCGATCAG
CCGAAGATCG TGCTGCCGAT GCTGCCGCCA TCGAGCGACA AGACGCCGAA GTCGAAGCCT
TTCGAGTAA
 
Protein sequence
MKSSRSRVLS TFSTATFITV LFAATVSSAH AAEPQAEPIQ PIAPAKVQHP ERVALGEKLW 
FDPRLSRSGF ISCNSCHNLS MGGSDNLKTS IGDKWKQGGI NSPTVLNSSL NFVQFWDGRA
KDLPEQARGP IANPIEMAFT HELAVDTLRS IPGYVDEFRK VFKSVKLTIS EITLAIAAFE
ETLVTPNARF DKWLKGDKTA INAQELRGYQ LFKGSGCVAC HNGQNIGGNS FQKMGLVEPY
KTGNPSEGRA AVTGKDADRF NFKVPTLRNV ALTYPYFHDG EAATLSQAVD TMGRLQLARK
FTPEENADIV AFLKTLTGDQ PKIVLPMLPP SSDKTPKSKP FE