| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4963 |
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| Symbol | |
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| ID | 4041825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1631672 |
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| End bp | 1635040 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980384 |
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| Product | two-component sensor response receiver component, histidine kinase |
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| Protein accession | YP_587094 |
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| Protein GI | 94313885 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.341676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGC TGATCAAAGG AGAGAAGCTG GCCGCGTTGC CATTGAGCAT CTCTCAGATC
CGCAATCTGG TTTATGTCTT TGTCACCTGC CTGCTGGTGC TGATCGGGCT GTCGTGGTTC
GTGTTGCTCA AGTACCGCAT GGACGAAGCC GTCGACCGGC AGAAGATCCT GTTCCAGGCA
CGTGCGGAAC AGGTGGAGGC AAATCTGACT GCGGTGCGGA GAATGACGCT GCGCGCGCAA
GGCACGCTCG AACGTCTGAT CGAGGTTGGC GTCGGTAAGC CTATGGCGCA GACCACCAGT
CGCGACTGGA TCGACCATCT GCAGAAGCGT GGCGAACGAC CGTACGTGGC GTTGCCCATT
TCCGCTGGAC GGGAGGCGAT ACCGGCCGAT GCCAGCATTG CGCCGCTGGC GAACGTGCTG
GCGTTCATGT TGCGCGTGAG CAGTGTCCAG TATCAGGGCC TGGAGAACGT CTGGCTCGTT
GACCTCAATG CCGATCGTTT CTATGTCACG CCACGCAATC TGCCGCAAGC CAGGGAGACG
CTGCGGAACG ACGCGACGTA CCAGGCCTTC GTCGAAGGGA GTATTGCGCG ATTGCGCAGC
CGGAAGCTGC TGGAGCAGTT GAAGGCGGCC CCCGGCCGCG TCGTGATGCT GGAGCCGGGC
TACGACTGGG TGTCTCGCAC CCCCATCGTT ACGGTGGCGA CCCTGATCCA TGTAGATGGC
GAACCGCGCG CCGTGTTTGC GATGGACTTT CCGCTGAGCG CGATCTTTCC CGAGGATGAC
GACCTTGAGG ACGGCTTCTT CGTGCAGACC GCGGAAGGGA CGATCCTCCG GCCGGATTCC
ATGTCCCGGG ATCCGCTGCC GCCGGCAGTG AGCCAGGCGC TCGTGAAGCG AGCCCATGTC
GCGACGAACT TGCCGACGTT CGTGGGCAGC GGGCTACTAC CCAGCGTCAT GGTGCTGGAC
GGTCCGGTGG ATCGCTCCGG ATGGCGAGCC GTGGAGGTGG TGGAGACCGG CATGCTGTGG
GAGAGCCTGC GGCGGAACAC GCTTTGGCTG TTCGCGTTGA CTGGGCTGAC CTGCACCTTG
ATGCTGGCAT GGGTCCGGCT GGTGGACAGA CGCATCATGC GGCCTACGCA AACGCAATCA
TTGCGCCTGC AGGAGAGCGA AGTCCTTGGG CGCACCATCA TCGAGTCGAC CGGCGTCGGG
CTCGTGATCC TCGACAGTAC GAACGCCGCG GTGTTGATGG AGAACGATGT CTCCGATCGG
ATCACGGCTC ACGCAAAGCC CGGAGAACTG GCGCGCTTTC ACCGCGCGGC CTGCAATGCG
CTGGCGGATG GCGAGCGCGG CAATACGGTT GGCCGGCATG GGAAGTTCAA CTTCGAGCTG
GCGCATACCG ATGAAACGGT GAGCTATCTT ACCGTCCGTG TGGTCGAGTC AACGTATCAG
GGCAAGCCGG CGAAGCTCTG CGCCATGGAC GACGTGACCG CCGCCCGGCA GAGCGAATCC
ACGCTGCTCC AGGCCATCCA TGACGCGGAT GCGGCGAACC GGGCAAAGTC CGCCTTTCTC
GCGACGATGA GCCATGAGAT TCGCACGCCG TTGAACGGCA TGCTCGGCAG CATCGAACTG
CTGGAGGTGA GCGCGCTCGA CGCGGCCCAG CGCGACCAGC TGGAGGTCAT GCAGCAATCG
GCGCAGTCGC TCATCCAGAT CATCAACGAC GTGCTCGACT TCAGCAAGAT CGAGGCCGGG
CAGATGGCAT TGCAGGCGCG CCCCTGCCAG ATCGATAGCC TTGTCGAGGA CGTTTGCCGG
CGGTTTGCCC CGGATGCGGA GCGCAGGTCG TTGCAGCTAC TTTGCGTGAT CGATCCCGCG
TTGCACGCCC CAATCCTGCT CGACCCACTC AAGACGGAGC AGGTGCTCGG CAATCTCGTC
AGCAACGCGA TCAAGTTCAC GGAGCAGGGA AAGGTTGTGG TCGAGGCTAC CACCATGACG
GAAGGTGGTA GGGACTGGCT CAAGCTGCGC GTGATCGACA CCGGCATTGG TATCGCCATC
GAGGATCAGC AGCGCCTGTT CGCGCCATTC GTGCAGGCCG AGCAGTCGGA CTCCCGCCGT
TTTGGCGGCA CGGGGCTGGG GCTCTCCATC TGCAACCGGC TCGTCGGGCT CATGAACGGT
TCCATTCGCC TGGTGAGTGA GCCGGGGCTC GGCAGTTGTT TCGATGTGCG CATTCCGATG
GAGCCGGTGA CGGTCACGCA GCCGGCCGAC ATCGTGCAGA CCGGTCTCTT GAACGATTTG
TACATCGCGA ACGGCCTGAG TGGTCTGACC GTCGGGCTGT GCAGTCCCTC GCGCGAGACT
TACCACGGGA TCGAGCACCT GTTGCAGCAC TATGGTGCGG TGGTGGTCAG GTTCGATTCC
TCGCAGCCGC CCGCCACGCC CGTGGATGTG GTGGTCTGCG AGCACGGGGA TATCCATGCC
TGTCCCGATG CCGACGTCGT GATCGAGAGC AACGCGTCCC TGTTGCCAGA CACGAGTCAG
ACGCCGATCC GTGCCTCGCG GTACGCGTGG CGCGGCCTGG TTCAGGCGAT TCTGACCGCC
GCAGGGCTTG AACTCCCGAT GCCAGTGCAG CGGCGTGCCG ACTCTGCGCA GGGGCATCTC
GCGCTCAAGT CGCTGCGCAT CCTGCTGGTG GAGGATCATC GCGTCAACCA GGTTGTCATG
CGCCGGCTGC TCGAATGGCT CGGGCAGCGG GTGGATGTTG CCGGCGATGG ACGGGAAGCG
CTGGCGCTGA CCGCGAGCCA GTCCTACGAC CTGATCCTCA CCGACCTCCA GATGCCGTCC
ATGGATGGAT ACGAACTTGC GCGGACGATG CGCGAACGTG GGATCACCGT TCCCATCATT
GCCGTGACCG CCAGCGTTGG CCCCGACCTG CAGAGTGCGT GCCAGAAGGC CGGCATCAAC
CGCTGCCTGA CCAAGCCGGT ACGGCTCGCG GCGCTTCGGG AACTGATCGA GCCCTTGGAT
GCTTCACCAC CCTTGCCGGG TACGGAACCG TCACTAATCC CGAAGGAAGC CATGATGTCC
TTGAGCGAGT ACCTCGGCGA GGACCTGGCG GAACTGTCGG AGGCGGCGGC CGCAGGCGAT
ACCGTCCGCC TGATGCGCAA GCTTCATGCC CTGGCCGGCG CGCTGGCCAC GCTTGGTCAT
GCGTCGGAGT CCCAGGCATG TCGGTGGCTC GAGCGAACCA TCGAGGAGTC CGGTCTTGCG
GGCATGGAGG AACAATGGAT TGCCCTGCGC ACGGCCCTGG AAACGCTGAT CGCGCAGTAC
GCGGGCGTGG ATCTCGGGCA GCCCGTCCGC CGCGCGTCGG CTCCCGGGCT GCCCTTGCCC
GATCGATAA
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| Protein sequence | MRKLIKGEKL AALPLSISQI RNLVYVFVTC LLVLIGLSWF VLLKYRMDEA VDRQKILFQA
RAEQVEANLT AVRRMTLRAQ GTLERLIEVG VGKPMAQTTS RDWIDHLQKR GERPYVALPI
SAGREAIPAD ASIAPLANVL AFMLRVSSVQ YQGLENVWLV DLNADRFYVT PRNLPQARET
LRNDATYQAF VEGSIARLRS RKLLEQLKAA PGRVVMLEPG YDWVSRTPIV TVATLIHVDG
EPRAVFAMDF PLSAIFPEDD DLEDGFFVQT AEGTILRPDS MSRDPLPPAV SQALVKRAHV
ATNLPTFVGS GLLPSVMVLD GPVDRSGWRA VEVVETGMLW ESLRRNTLWL FALTGLTCTL
MLAWVRLVDR RIMRPTQTQS LRLQESEVLG RTIIESTGVG LVILDSTNAA VLMENDVSDR
ITAHAKPGEL ARFHRAACNA LADGERGNTV GRHGKFNFEL AHTDETVSYL TVRVVESTYQ
GKPAKLCAMD DVTAARQSES TLLQAIHDAD AANRAKSAFL ATMSHEIRTP LNGMLGSIEL
LEVSALDAAQ RDQLEVMQQS AQSLIQIIND VLDFSKIEAG QMALQARPCQ IDSLVEDVCR
RFAPDAERRS LQLLCVIDPA LHAPILLDPL KTEQVLGNLV SNAIKFTEQG KVVVEATTMT
EGGRDWLKLR VIDTGIGIAI EDQQRLFAPF VQAEQSDSRR FGGTGLGLSI CNRLVGLMNG
SIRLVSEPGL GSCFDVRIPM EPVTVTQPAD IVQTGLLNDL YIANGLSGLT VGLCSPSRET
YHGIEHLLQH YGAVVVRFDS SQPPATPVDV VVCEHGDIHA CPDADVVIES NASLLPDTSQ
TPIRASRYAW RGLVQAILTA AGLELPMPVQ RRADSAQGHL ALKSLRILLV EDHRVNQVVM
RRLLEWLGQR VDVAGDGREA LALTASQSYD LILTDLQMPS MDGYELARTM RERGITVPII
AVTASVGPDL QSACQKAGIN RCLTKPVRLA ALRELIEPLD ASPPLPGTEP SLIPKEAMMS
LSEYLGEDLA ELSEAAAAGD TVRLMRKLHA LAGALATLGH ASESQACRWL ERTIEESGLA
GMEEQWIALR TALETLIAQY AGVDLGQPVR RASAPGLPLP DR
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